Trichoderma atroviride: 25780488
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Entry
25780488 CDS
T10217
Symbol
TrAtP1_011471
Name
(RefSeq) uncharacterized protein
KO
K20353
COPII coat assembly protein SEC16
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tatv04131
]
25780488 (TrAtP1_011471)
Membrane trafficking [BR:
tatv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
25780488 (TrAtP1_011471)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Sec16_N
Motif
Other DBs
NCBI-GeneID:
25780488
NCBI-ProteinID:
XP_013940083
UniProt:
G9P8V2
LinkDB
All DBs
Position
6:complement(join(2629403..2629974,2630029..2635012))
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AA seq
1851 aa
AA seq
DB search
MASEPLTSSWNPALMPNSVHDIAVAPDDHDDHVIPSASAEPLPETLEYSPAHEEEQNGVD
HHEDEHGTEDQSYPRGGGVEEGAELASEPQTVTAEEPTEPSAPETENQEEDATGPATRTA
QHSSSMSFARTVSTEISFGDDDDAEWTLSRTDTDPFKFMPPSERSNSFPAVPLMAEDPEL
IEDTPLPPNQALDVLEEAERDVHIEEEEYQADAHPQPSSDTVDKASKDSHHRHAHSTSIG
GDIQWAEDEESEARYEEGVPLIPHAQASSDPAASSENTHIPSFDDDNDNEDDDFFNQINQ
SEADATSRGQEDEPLQRKSTMQVLASTDQEFPSRQSTLDETLEWDEEGFTGLDVKVTEEP
EALEEAGNRNETEAPQTQDLASKWQEAFAADDDEEDFLIENTPAEEPGVDAAAFLGSDDE
GLLDDIDEAQPPAQTAPLSSQTNSVASTPAFAPPSYRPALQRSASASAYTPVTPPLQSPF
YNAPTQGAVSQSPLQYGQAPPQQATDSPKAQSFADKAKGGYSSPYDLPSDLVTSTVKPRK
RASMQQLQLDNSSLQPPPPPRSASLSATDSGPPSGGIQKSPLLRHKSGFFEDLPTAPKPR
SMSRSSNRAASPNPYGLATSPHGPSPLSPPMATQIPPAALSSSLKMTLVAPERVNPYTPL
QSPNAPLPTPTANVSRYSPAPPPQGAGSQSAPPPTTRYSPAPPAPNPTAAYNPAVVSATS
PQAALPHLPRTSSPLAHFEISSDKPLGASGEAVHAERRASSSYEPRLTRVASLPPTREVE
EEDDLVANNTRSPPPLPIPSAQSTLSPPKRPGSGYMPNSLPSTQPGFVPPPRAHTQSPGA
TRGGQYVPKHAEAARRPVSSHSPVSPPSVKIAHASHTHPRPPSLNINMIAPTDGREHDPL
QRWQGVPIISWGVGGTVVTSFPKSIPRYVMNQTAPSMLRASGEVKVQNIKDIESLPDRLA
KFPGPLKGKSKKKEVLAWLTSGIDGLEKELPEISFHPQLSYEAKRSIERLLLWKILRIFI
EHDGVLEGNPAAEKAVRDVLSPGTVTPTADNDALFSTDPTISINGAIATSMQADGADSAT
MEQIRLDLLKGNRETAVWAAVDKRLWGHAMLISHTVSPDLYKRVAQEFIRKEVNHPGQSN
ESLAALYKILSGNYDDCVDELVPVHARAGLQLVSTGSSSEPTKDAMEGLDKWRETLTLVL
SNRSADDVRGLNALGKLLSSYGRAEAAHICFIFGRQISVFGGFDDPNVDFVLLGSDHRQN
SHQLGRDTEALQLSEVYEYGLSLSGTPSAAAGAPHLAPYKLHHAITLAEYGYRDRALQYC
DAILSAMSSQTKRSPYHHPVLEASVDDFMRRLKQAPREESSSWMSKPSMNKVSDSMWNRF
NKFVAGDESENANGTPGEESGPFARIGTPSMSRSPSVSNFDTLGISSPAYPGAGAPAATS
ALSSALSRYAPATSQPTYGVEPPQLPSSFSQPTLNSSEYPASAYGVSPSLPGSPPGRGNG
FAPSSLGYQPMTTGVNNKGKTPMGGYQPLYQEPVSSQRPHEEPATTPSTAGFQPMSYGYE
PPLNNTSISETGINNADVTEGASNGYEPPSFQPYGYEPPSYQPDLGPSADENEDEPKPKK
KSFMDDDDDDFGTGSSTAREKSKAEKDRENQEMFRKAAEEDAKRAAAAQQAKKGWGFSGW
FSGSNKKEIGSPGEASSPGKPIKAKLGEASSFVYDPELKRWVNKKPGAEQVEAKAATPPP
PRALGSPRSASGTPPQTPPPPQGRASLPPSSSFGSLAPPAVLNRAPSQESLGAPPMLRSM
STASTDSKPSSRPTTSMSNASSIDDLLSASGPRKPGQKKARKGRYVDVMAK
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgagccgctcacatcatcatggaatccggccttgatgccaaatagcgtccat
gatatcgcagtagcccccgacgaccacgacgaccatgtaataccatcagcatccgcagag
cccttgcccgagactttggagtatagcccggcgcacgaagaagagcaaaatggcgttgat
catcacgaggacgagcatggcacggaagaccagtcttatccccgcggtggcggcgtcgag
gagggtgctgagctggcctcagagccgcagaccgtaacggccgaggaacccacggagcca
tcggcacctgaaaccgagaatcaggaagaagatgcgactgggccggcgacccgcactgcg
cagcattcgagctccatgtcctttgctcggacagtttcaaccgaaatcagcttcggcgat
gacgatgatgccgagtggactctgtcgaggactgatacggatcctttcaagttcatgccc
ccatctgagagatcaaattcttttcctgccgtgcctctcatggcagaagacccggagctc
atcgaagatacacctttgccaccaaatcaggcgcttgacgtattggaagaggcggagcga
gatgttcatattgaagaggaagagtatcaagctgatgcgcatccccagccaagctcagat
accgtggataaagcttccaaggattcgcaccacagacacgcgcactccacatccataggc
ggggacatccaatgggctgaagatgaagaatccgaagcgcgatacgaagaaggcgtgcca
ctgatcccgcacgcacaagccagctctgaccctgcagctagcagtgagaatacgcacatc
ccttcttttgacgatgacaatgacaatgaagatgacgactttttcaatcaaatcaaccaa
tctgaagcagacgctacaagcagaggccaagaagacgagccattgcagcggaaatcaact
atgcaggtcctggcatctacagatcaagaatttccttctcgtcagtccacgctggatgag
actctcgagtgggatgaagagggatttaccggcctggatgtcaaagtgacggaggaaccc
gaagcgcttgaagaggcaggcaacagaaatgaaacggaggccccccaaactcaagacctc
gcgtcaaaatggcaagaagcgtttgctgccgatgacgatgaagaggatttccttatcgaa
aatacaccagcagaagagccgggagtagacgcagccgcgttcctgggcagtgacgacgaa
ggattactggatgatatcgacgaagcccagcccccagcacagactgcgccgttgagctcg
caaacaaatagcgtggcatcaacaccggcttttgcgcccccttcatatcgacctgctcta
cagcgatctgcgtctgcgtctgcctacacgcctgtcacaccaccgctgcaatctccgttt
tataatgccccaacccagggagcagtgtcacagtctccactgcaatatggccaagcgcct
cctcaacaggcaacggattcgcccaaagcccaaagctttgccgacaaagcaaagggagga
tattcgtcgccttatgacctaccctcagatttggttacctctacggtgaagccaaggaaa
cgagccagtatgcagcaactccagttggacaattcatcgcttcagccccctccccctccg
cgaagcgccagcttgagtgccaccgattcaggccctccaagtggtggtatccaaaaatcg
ccgctcttacgacacaaatcaggcttctttgaagatttacccaccgcaccgaagccacgt
tcaatgtccaggtcaagcaacagagcagcttctcctaacccgtatggcctggccacctcg
cctcatggaccgtctcctttgagccctcccatggcaacccagattccgccggcagctctc
agctcttctctaaagatgactcttgtcgctcccgagcgagtgaacccatacacgcctctc
caatcgccaaacgctcccctgcctacaccaactgccaacgtatccagatattctccggct
ccccctccccaaggagctggcagccaaagtgcgccgccgcccacgactcgatattctcct
gcaccgcccgctcccaatccaactgccgcctataatccagcagtcgtctcggcaacctcg
cctcaggctgctttgcctcatcttccgcgaacctctagtccgctggcacatttcgagatt
agcagcgacaagccattgggtgccagtggagaagctgtccacgccgagcgacgagctagt
tcctcgtacgagccgagactcactcgagttgcttctctcccccctacccgcgaggttgaa
gaagaagacgatctggttgctaacaacacccgttcgccaccacctttgcccattccttcc
gctcagtcaacgctatcccctccaaagcgaccaggctctggctacatgcctaacagcctt
ccttcgactcagcctggatttgttccaccccctcgcgctcatacgcagtctccaggagct
actagaggtggccaatatgtcccgaagcatgcagaggctgctcgccgacctgtttcttca
cactcgcctgtgtctcccccctctgttaagattgcccatgcttcccatacccatcctcgg
ccgccatccctcaatataaatatgattgctcctacggacggccgagagcatgaccccctt
cagagatggcaaggcgtccccattatctcatggggagtgggtggtaccgtggtgacttct
ttcccaaagagtatcccgagatatgtgatgaaccaaacagcaccgtcgatgctgcgagct
tcaggagaggtcaaggtgcagaatatcaaggatattgaatctctaccagaccgcttagcc
aaattccccggtccactgaaaggcaagtcgaagaaaaaggaggttctcgcgtggcttact
tcgggaatcgacggcttggagaaggaacttccagaaatatcctttcacccgcagctttct
tacgaagccaaacgaagtattgagcgcctgttgttgtggaagatccttcggatatttatc
gagcatgacggcgtgttggaaggcaaccctgcggccgagaaggctgtgcgagatgtcctc
tccccagggactgtaacacccaccgcggataacgatgctttgttttctacggaccctact
ataagcatcaatggcgctatagctacctcaatgcaagctgacggtgctgattccgctact
atggagcaaatccgtctagatcttctcaagggcaaccgcgagaccgccgtctgggcagcg
gttgataagcgtctgtggggacatgccatgctcatttctcatacagtctcgcctgacttg
tacaagcgtgttgcacaagaatttattcgcaaagaagtcaaccaccctggccagagtaat
gaatcactcgccgctctatacaagatcctatcgggtaattacgacgactgtgtcgatgag
ctagttccagttcatgcacgcgccggcctgcagcttgtctcaactgggtcgtcttctgag
cccaccaaggacgctatggaagggctggataagtggagggagaccttgacgcttgttctg
agcaaccgaagcgctgacgacgtccgcgggttgaacgcccttggcaagctcttgtccagc
tatggaagagctgaagccgcccatatttgcttcatatttggcaggcagatatctgttttt
ggcggcttcgatgatccgaatgtagactttgtccttttggggtcggatcaccgccaaaac
tcacaccagcttggaagagacacagaagctttgcagctcagtgaagtgtacgagtacggg
ctttcactttcgggcaccccttctgccgctgctggcgctccccatctcgcgccctacaaa
ctccaccacgccatcacgttggctgaatatggctaccgggacagggctctgcaatactgt
gatgctattctctcagccatgtcatcgcagacgaagaggtcaccttatcatcacccagtt
ctggaggcctctgttgacgacttcatgcggcgcttgaaacaggcaccgagagaagaatct
tcctcgtggatgtccaaacctagcatgaacaaggtttctgatagcatgtggaataggttc
aacaagttcgttgccggagatgagtctgagaacgccaatggcaccccgggcgaggagagt
ggcccatttgcccgtataggaacgccgtccatgagccgctccccgtcggtttccaacttt
gacaccctgggcatcagctcacccgcatacccaggggccggtgctcctgctgctacgtcg
gcattgtcatcagcgttgtcgcgatacgctccggcaacttcccagcctacctatggtgtt
gagccgccacagctgccttcttctttctctcagcctacactcaactcaagcgagtaccct
gcgagcgcatacggggtctccccttctctccctggctctccacctggacgtggcaatgga
tttgcgccatctagccttggctaccagccaatgactactggtgttaataataagggcaag
actcctatgggtggttaccagccattatatcaagagccggtctcatcacaacgaccccat
gaagagccagctacaactccctctacggcaggtttccaaccaatgtcctatggatatgaa
ccccccttgaataacaccagcatatccgaaactgggatcaataatgcggacgtaacagag
ggcgcgtcaaatggctatgagcctccatctttccagccttacggatatgagcccccgtcc
tatcagcccgaccttggaccctctgcagacgaaaatgaggatgaacccaagcccaagaag
aagagtttcatggatgatgacgacgatgattttggtactggtagttcaacggccagagaa
aaatctaaagcggaaaaggatcgtgagaaccaagagatgttccgcaaggcagcggaagaa
gatgcgaaacgcgctgctgctgcgcaacaagccaagaaaggctggggcttctcaggctgg
ttcagtggcagcaataagaaggagattggaagtcccggagaggcatcatctcctggcaag
cccatcaaggccaagctcggagaagcaagcagttttgtatatgaccctgaactcaagaga
tgggtcaacaagaaacccggagctgagcaagtcgaagcgaaagcggccacccctccgcca
cctagagcgcttggcagtccacgatccgccagcggaacacctccacaaacgccgccacct
ccgcaaggccgagccagccttccaccttcatcttcttttggttcgttggctccgccagca
gttctcaacagagccccgtcacaggaaagccttggcgcaccgcccatgttacgatccatg
tctaccgctagtaccgatagcaaaccgtcaagcagacctactacgagcatgagcaacgct
agtagtattgatgacttgttgagtgcatcaggaccccgtaaacccgggcagaaaaaggca
aggaaaggccgctatgtcgatgttatggccaaataa
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integrated database retrieval system
