Trichoderma atroviride: 25780501
Help
Entry
25780501 CDS
T10217
Symbol
TrAtP1_011776
Name
(RefSeq) uncharacterized protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
tatv Trichoderma atroviride
Brite
Enzymes [BR:
tatv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
25780501 (TrAtP1_011776)
Ribosome biogenesis [BR:
tatv03009
]
Eukaryotic type
90S particles
Helicases
25780501 (TrAtP1_011776)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
HA2_N
DEAD
OB_NTP_bind
AAA_19
AAA_22
AAA_23
nSTAND3
AAA_16
DUF6218
PhoH
AAA_30
T2SSE
TsaE
ATPase
Motif
Other DBs
NCBI-GeneID:
25780501
NCBI-ProteinID:
XP_013940321
UniProt:
G9P577
LinkDB
All DBs
Position
6:complement(3504219..3507851)
Genome browser
AA seq
1210 aa
AA seq
DB search
MAKFVPRQRKHRVLARERAQENARHEVEDTNQEILPAAKKDLEEKKARMKEQLKQDGVKM
SGKKAKRLEKYIDNKLRKDENRELLAKLAERKIDTSLFSSSRSLGQGRETKKQALTRALR
EHRAGVDPTSSAENIIFEQRPEVDEDERDDEDDADMSDDEPAPAPAPVPAPKTETKPTKA
AAKPTEEPTAAAATPISIGSGLKRALEVDNEGRPVIQKRQKRGGLKSKISLVADQQPPWE
ESEDDEWNGLSGDEKDEASEDSEDESDKGSEDNSSEDSEEDESESEEESSEDEVMDEEQK
SNRSSSFKAWAHQQINEAQGYQPVDAASSALDIPKPENFVPRAPEQDPLPMELQVAENTS
RKVFSVGVVRTPEIQEARMKLPVVSEEQRLMEAIHNHDIVVICGSTGSGKTTQIPQFLYE
AGYGSPDSPTPGMIGVTQPRRVAAVSMSKRVADELGDHSSAVAYQIRFEGNVDAKTAIKF
MTDGVLIREVAQDITLRKYSAIVIDEAHERSVNTDILIGMLSRVIKLRAELSQEDPTIKP
LKLIIMSATLRIEDMTMNPTLFSTPPPVVEVEGRQHPVTIHFSRRTHPDYVEEAFKKISR
GHKKLPPGGFLVFLTGRNEILQLSKKLKAAFGGPRSAEGPKVQISATEAPVEVEDLEFGD
VDSHDFDDFDGIDSDDEGEGEDEFKIDEEDEVVPLKMQILPLYSLLPVREQLRVFEDVPE
GTRKIILATNVAETSLTIPGMRFVFDCGRSKERNYDRLSGVQSYEIGWISKASASQRSGR
AGRTGPGHCYRLYSSAVYERDFQEFSDPELLRTPIEGIVLQLKAMNLQNVVNFPFPTPPD
RQMLARAEKLLTYLSAISPSGQVTKVGTTMSMFPLSPRFARILLVGHLHNCLPYTIALVA
GLSAAEVYLSEAQAIPALAAKDDTEIRTAEDVIAEDRQANARRLFNQVQKNFCFLDDKSD
AIKLLQVVGEYAHEPTEKWCEAHFVRFKVLKEIQQLRKQITDLLRTNIPSFAALKHQDKL
DPPSPKQVSALKQMTAAGFLDQVAIRADLAPNPPEQFRKPRRAIDVPYIPLIPLHRPGSG
EDPCVYIHPTSSLAHVSIQECPEYIVYAYLQRATPSGALDSEKKPKTRMHALTDVTGGQL
AGLAKGTPLISYGKPIKEVKAQSLGADGAMTRECWVVPYLRAENTAGQGWPLPAQKVKQK
KLAGKGWVVE
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttcgtacccagacagagaaagcacagggtgctggctcgcgaacgagcccaa
gagaatgcccgccatgaagtcgaagacaccaaccaggaaatcttgccggccgcgaagaag
gacctggaggagaaaaaggcacgcatgaaggagcagctgaaacaggatggcgtcaagatg
agcggcaaaaaggcgaagcgtctcgagaaatacatcgataacaagctccgaaaagacgaa
aaccgagaattgcttgcgaagctggccgagagaaagattgatacgagtctgttttcgagc
agtagatctcttggacagggccgcgagacgaagaagcaggccttgactcgtgcgctgaga
gagcacagagctggagttgatcctacatcgtcggcagagaatatcatttttgaacagcgg
ccagaggttgatgaggatgagagggatgacgaagatgatgcggacatgtcggatgacgag
cctgcgcctgcacctgcgcctgtgcctgcaccgaaaactgaaactaaacccacaaaagcg
gctgccaagccgactgaggaaccgacagcggcagcggcaacgccaatttccattggatct
ggccttaaacgagcgctcgaagtagataacgaaggccgaccagtcattcagaagcgacaa
aagagagggggcctaaagtcaaaaatctctctcgtcgcggatcaacagccaccttgggaa
gaatcagaggatgacgaatggaatgggctcagcggcgatgagaaagacgaagccagcgag
gactccgaagacgaatctgacaaaggctctgaagataattcgagcgaggactccgaagaa
gatgaatccgaatccgaagaagaatcaagcgaagacgaagtaatggacgaagagcaaaag
agcaataggtcatcctctttcaaagcatgggcccatcagcagatcaacgaggcacaagga
taccagccagtagacgcagcttcgtctgcactggatatacctaagccagaaaactttgtc
cccagggctcccgaacaagatccgctaccgatggaactacaagtcgccgaaaacacttca
agaaaggtctttagtgtaggtgttgtgcgaacgcctgagattcaagaggctcgaatgaag
ctcccggttgtttcagaagagcagaggctcatggaagcaatccacaaccatgatattgtc
gtaatatgcggttctaccggttcgggaaagactacgcaaattcctcaattcttgtacgaa
gcaggctatggatctccagactctccaacaccagggatgattggtgtcacccagcctcgt
agggttgctgccgtcagtatgtctaagcgagtggcggacgaactgggcgaccattcaagc
gcagtggcttatcaaatccgatttgagggcaacgttgatgcaaagacggccatcaagttt
atgactgacggtgtgttgattcgagaagttgcgcaggatatcactctgcgaaagtactcg
gccattgttattgacgaggcccacgagagaagcgtcaataccgatattttaattggcatg
ctcagtcgagtgattaaattgagggccgaattatcacaagaagaccccacgatcaagcct
ctgaaactcatcatcatgtctgccactctacggatagaagatatgaccatgaacccgact
ctcttctcaacgccaccgcccgttgtggaggtcgaaggacgtcagcatccagtgactatt
cacttctcacgccgtactcaccccgactacgtagaagaggcgttcaaaaagatcagcaga
ggccataaaaagctgccccctggtggatttttggtctttttaactggccgaaacgagatc
ctgcagctaagcaaaaagttaaaggcagcttttggagggccaaggtcagctgaaggcccc
aaagtgcagatatctgcgactgaagcaccagttgaagtcgaagatttagaatttggcgat
gttgattcgcacgattttgacgattttgacggtatcgattccgacgacgagggagaagga
gaagacgaattcaaaattgatgaagaagacgaagttgtccccctcaagatgcagatattg
cctctctactcattacttcccgtcagagagcagctgagagtctttgaagacgttccggaa
ggcactcgcaaaatcatattggccaccaacgttgcagaaaccagtttgaccatccctggt
atgcggtttgtctttgactgtggacgctcaaaggagaggaattatgaccgcctcagtggt
gtccagagttacgagattggatggattagcaaagccagcgctagccagcgatctggtcgt
gctggacgtacgggacctggtcattgttatcgcctctactcatcggctgtttatgagaga
gacttccaagagttctcagatcccgaattgctccggacacccatcgaaggcattgtgttg
cagctcaaagccatgaacttgcagaacgtcgtcaatttcccctttccaacaccccccgac
cgacagatgcttgccagagctgaaaagctacttacatatctttccgccatctcccctagc
gggcaagtcacaaaggttggaacgacaatgtccatgttccccttgtcacctcgctttgca
agaattctgctcgtgggacatctccacaactgtctgccctataccattgctctggtagct
ggattgtccgcagcggaagtctacctctcggaggctcaggcaattccagctctggctgct
aaagacgacactgagattcgtaccgcagaggatgtaatcgccgaagatcgacaagccaat
gccaggcgattgttcaaccaagttcagaagaatttctgctttttggatgacaagtctgac
gccatcaagttgctgcaagtggtgggcgaatatgcgcatgagccgactgagaagtggtgc
gaggctcacttcgtccgtttcaaggtcctcaaggagattcaacaactgcggaaacaaatc
acagacttgctgcgcacaaacatcccgtcattcgcggcgctcaagcaccaggataagctg
gatcccccatcacccaaacaagtcagtgccttgaagcaaatgactgcagctggcttcttg
gaccaagtcgccatccgcgctgatctcgcaccgaacccgcccgagcagttcagaaagcct
cgccgagccatcgacgtgccatacatccctcttattccattacacagaccgggcagcggc
gaagatccatgcgtttacatccacccgacctcttcgctcgcacatgtcagcatccaggaa
tgccccgagtacatcgtctatgcctatctccagcgagccacgccttctggtgcacttgac
tcggaaaagaaaccgaagacgagaatgcacgctcttacagacgtgacgggaggacaattg
gccggactggcgaagggcacgccgcttattagctacggaaagccaatcaaggaggtgaag
gcgcagtcgttgggagcagatggtgccatgacgagagaatgctgggtcgtaccgtatttg
agggcagagaatactgcaggacagggatggcccctgccggcgcagaaggtaaagcagaag
aaattggcgggcaagggatgggttgttgagtga
DBGET
integrated database retrieval system
