Trichoderma atroviride: 25781371
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Entry
25781371 CDS
T10217
Symbol
TrAtP1_012814
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
tatv Trichoderma atroviride
Pathway
tatv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
25781371 (TrAtP1_012814)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25781371 (TrAtP1_012814)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
25781371 (TrAtP1_012814)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
25781371
NCBI-ProteinID:
XP_013944001
UniProt:
G9NUN3
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Position
7:join(2421248..2421257,2421360..2422507)
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AA seq
385 aa
AA seq
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MKNDAFLDTGAQNSIPSKAQNFFPPNGAICASVSRKYSSTTPKTLEPSWHQSWAYRALPL
PNSHLIRISSQTSNHPTNRPPPARSNGRTPFEVRKPTVNLSSLSHAHGSALVRTGDTTVI
CGIRAETILTENIPNYRASNTQTELSDYDLLVPNIELATGSAPQFLPGGPPTTLAQTLST
KIYSLLHSSKLLRAEDLRIWHNRPAEVSFADEEEGAEESDQKEGEKYVVAYWVLYIDLFF
ISFDGNPFDAAWAATVAALRDTKLPQARYDPDREMILCSRKDPKPLTVESMPISCTAVIF
TGKETKDQPADGKFWLLADPDTLEESLCDETVTIVIDCTGGSRRILSISKHGGTVMTAKL
LTSKEFLNWASTRWEDFASAITGSQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgacgcctttttggatacgggagctcaaaactcaattccaagcaaagcccaa
aatttctttccccccaacggcgctatttgtgcatccgtctctcgaaaatactcctcgacc
acgccaaaaactctcgaaccatcatggcaccagagctgggcctatcgcgctctacctttg
ccaaactctcacctcatccgtatctcctcgcaaacctcgaaccatccgacgaatcgaccc
ccccctgcgcgaagcaatggccggactccttttgaggtgcggaaacccacagtgaatctg
tccagcttgtcacacgcccacggaagtgctctggtgcggacaggagacaccacagtcatt
tgcggaatccgcgccgaaaccattctgacagagaatatccccaactaccgcgcatccaat
acacagacggagttatccgattacgacttgttggtccctaatatcgaacttgccaccgga
tctgcaccgcaattcttgcctggcggtccgcccacaactctcgcccaaacattgagcacc
aaaatctactctcttctacatagctccaagctcctacgagcagaggacttgcggatatgg
cacaaccgaccggccgaagtctcattcgcagatgaggaagaaggagctgaagagagcgat
caaaaggaaggagagaagtatgtggtggcatactgggtattatatattgatcttttcttc
atctctttcgatggcaacccgtttgatgcagcgtgggcagcaacggtagctgctttacgc
gatacgaagctgcctcaggctcgctatgacccagacagggagatgattctctgctccaga
aaagatcctaagccccttactgtggaaagcatgcctatttcatgcacggcagtcattttc
accggcaaagagacgaaagaccagccggcagatggaaaattctggctgctggccgatcca
gataccttggaggagtcattatgcgacgagacagtcacaattgtcattgactgtacggga
ggctcaagaaggattctgtccatctcgaagcatggaggcacggtcatgacagcgaagcta
ctgacatcgaaggaattcctcaattgggcaagcacgcggtgggaggactttgcatcagca
ataactggcagccagtaa
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