Trichoderma atroviride: 25782061
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Entry
25782061 CDS
T10217
Symbol
TrAtP1_004192
Name
(RefSeq) uncharacterized protein
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
tatv Trichoderma atroviride
Pathway
tatv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
25782061 (TrAtP1_004192)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tatv03041
]
25782061 (TrAtP1_004192)
Spliceosome [BR:
tatv03041
]
Complex A
U2 snRNP components
U2 related factors
25782061 (TrAtP1_004192)
Complex B
25782061 (TrAtP1_004192)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
Torus
RRM_1
zf-CCCH_3
zf_CCCH_4
SCRG1
Motif
Other DBs
NCBI-GeneID:
25782061
NCBI-ProteinID:
XP_013939269
UniProt:
G9P7T0
LinkDB
All DBs
Position
2:complement(join(4238364..4238692,4238753..4238987,4239071..4239136))
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AA seq
209 aa
AA seq
DB search
MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPK
NRMNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQAAA
DTLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEELDRELTL
STKKWLKSRGRDERSASRSPTPEPTRRRF
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttcctcgcctccatcttcggcacagagcttgacaaagtcaactgctcattc
tactttaaaatcggcgcctgccgtcacggtgaccgctgctcgagaaaacacgtcaagccc
tcctacagccagaccatcctcatgcccaacctctaccagaaccccgcctacgaccccaag
aaccggatgaacgcctcgcagctgcagaaccactttgacgccttctacgaggacatttgg
tgcgagctgtgcaagtacggcgagctggaagagctcgtcgtatgcgacaacaacaatgac
catctcatcggcaacgtctacgcccgattcaaatacgaggacagcgcccaagccgccgcc
gacaccctcaacagccgctggtacgccgcgcgccccatatactgcgagctcagtcccgtc
acagacttccgcgaggcctgctgccgcctaaactcgggcgagggctgcgtccgcggcggc
ttctgcaatttcatccaccgcaagaaccccagcgaggagctcgaccgcgagctcacgctc
agcacgaagaagtggctcaagtcgcgtggccgggacgagcggagcgccagccgatcgcct
acaccggagcctactagaaggaggttttag
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