Trichoderma atroviride: 25782066
Help
Entry
25782066 CDS
T10217
Symbol
TrAtP1_004212
Name
(RefSeq) uncharacterized protein
KO
K03257
translation initiation factor 4A
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25782066 (TrAtP1_004212)
03012 Translation factors [BR:
tatv03012
]
25782066 (TrAtP1_004212)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tatv04147
]
25782066 (TrAtP1_004212)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
25782066 (TrAtP1_004212)
mRNA cycle factors
Stress granule specific factors
25782066 (TrAtP1_004212)
Translation factors [BR:
tatv03012
]
Eukaryotic type
Initiation factors
eIF-4
25782066 (TrAtP1_004212)
Exosome [BR:
tatv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
25782066 (TrAtP1_004212)
Exosomal proteins of bladder cancer cells
25782066 (TrAtP1_004212)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
IL17R_D_N
CMS1
Flavi_DEAD
fragilysinNterm
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
25782066
NCBI-ProteinID:
XP_013939284
UniProt:
G9P7U7
LinkDB
All DBs
Position
2:complement(join(4283887..4284540,4284619..4285043,4285134..4285211,4285399..4285432))
Genome browser
AA seq
396 aa
AA seq
DB search
MADKGLEDVPEGQIESNYDETVDSFDDMNLKSELLRGVYAYGFERPSAIQQRAIMPVIKG
HDVIAQAQSGTGKTATFSISVLQKIDPAVKQCQALILAPTRELAQQIQKVVVAIGDFMNV
ECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDAMKMFVLDEADEMLSR
GFTDQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTRFMRDPVRILVKKDELTLEGIKQFY
IAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQ
RDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG
VAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagggactcgaggacgtccccgagggacagatcgagtccaactacgatgag
actgtcgactccttcgacgacatgaacctcaagtctgagctcctccgtggtgtttacgcc
tacggtttcgagcgcccctctgctatccagcagcgtgctattatgcctgttatcaagggc
cacgacgtcattgctcaggcccagtccggtactggcaagaccgctactttctccatctcc
gttctccagaagatcgaccctgctgtcaagcagtgccaggccctgattctcgcccctacc
cgtgagctggcccagcagatccagaaggtcgttgtcgctatcggcgacttcatgaacgtc
gagtgccacgcctgcattggtggtaccagcgtccgtgatgacatgaaggccctccaggac
ggcccccaggtcgttgtcggtacccccggccgtgtccacgacatgatccagcgtcgcttc
ctcaagaccgacgccatgaagatgttcgtcctcgacgaggccgacgagatgctttctcgt
ggtttcaccgaccaaatctacgacatcttccagctccttccccagtccacccaggttgtc
ctgctctccgccaccatgccccaggacgtcctcgaggtcaccacccgattcatgcgtgac
cccgttcgtatccttgtcaagaaggacgaacttaccctggaaggtatcaagcagttctac
attgctgttgagaaggaggagtggaagctcgacaccctgtccgatctctacgagaccgtc
accatcacccaggccgtcatcttctgcaacacccgcagaaaggtcgactggctgactgac
aagctgaccgcccgtgacttcaccgtctctgccatgcacggtgacatggaccaggctcag
cgtgacctgattatgaaggagttccgatccggttcttctcgtgtcctgatcgccactgac
cttttggcccgtggtatcgatgtccagcaggtttccctggtcatcaactacgatctcccc
gccaaccgggagaactacatccaccgtatcggtcgtggtggtcgtttcggccgaaagggt
gttgccatcaacttcgtcactgccgacgacgtccgcatgatgcgtgagattgaacaattc
tacagcacccagatcgaggaaatgcccatgaacgttgccgacctgatctaa
DBGET
integrated database retrieval system
