Trichoderma atroviride: 25782476
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Entry
25782476 CDS
T10217
Symbol
TrAtP1_006798
Name
(RefSeq) uncharacterized protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03013
Nucleocytoplasmic transport
tatv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
25782476 (TrAtP1_006798)
03015 mRNA surveillance pathway
25782476 (TrAtP1_006798)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25782476 (TrAtP1_006798)
Enzymes [BR:
tatv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
25782476 (TrAtP1_006798)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
25782476 (TrAtP1_006798)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
25782476
NCBI-ProteinID:
XP_013937851
UniProt:
G9PBE3
LinkDB
All DBs
Position
3:join(4615943..4616214,4616276..4616761,4616843..4617080,4617140..4617631)
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AA seq
495 aa
AA seq
DB search
MSDLASRITKPDEAPKKVDWAESVEADENKQQAEAEAAAGAAETQVDGAVEELGGSGLHE
PEWDVEVSLSELQANEATPFHSATQWQDMGLSEDLLKGLLALKFLKPSKVQGKSLPLMLS
DPPRNMMAQSQSGTGKTAAFVTAILSRVDFTKPDQPQALALAPSRELARQIEGVVNAIGR
FIEPLKVAAAIPGALPRDQPVRSAVIVGTPGTVQDVIKRRQLDVSQLKVLVLDEADNMLD
QQGMGDQCLRVKNMLPKSVQILLFSATFPDKVGSYAMKFAPNAHSLKLQRSELTVKGISQ
MFIDCADDNIKYDVLCKLYGLMTIGQSVIFVKTRESANEIQRRMVADGHKVSALHAAFDG
NERDELLSKFRQGENKVLITTNVLARGIDVSTVSMVINYDIPMKGRGDSEPDAETYLHRI
GRTGRFGRVGVSISFVYDKKSYDALLGIANTYGIDLVRLDTDDWDEAEERVKEVIKKNRA
QAAYAPSATDNAKAS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacctcgcgagccgtattacgaagcctgatgaggcgccaaagaaggttgattgg
gctgagtctgtcgaggcagacgagaacaagcagcaggcggaagctgaagctgctgctggt
gctgctgagacccaggttgacggtgctgttgaagagctcggtggctctggtctgcatgaa
cctgaatgggatgtcgaagtctctctcagcgaactccaggcaaacgaagcaactcctttc
cactctgctacacaatggcaagacatgggactatcggaggaccttctcaagggtcttctg
gccctcaagtttctgaaaccctcgaaagtccaggggaaatctcttcctctgatgcttagc
gatcctccgagaaatatgatggcccaatctcaatctggtactggaaagacggcggcgttt
gttactgccattctatcgcgtgtcgactttaccaagccggatcagcctcaagctcttgcc
ttggcccccagtcgagaattggctcgtcagattgaaggtgttgtaaacgctattggtcgc
tttattgaacctctcaaggttgctgcggctatccctggagctctgcctcgcgaccagccg
gttcgatctgccgttattgttggtacccctggtactgtccaggacgtcatcaaacgaagg
cagctagatgtttctcaactcaaggttctcgtcttggacgaagccgacaacatgctggat
cagcaaggaatgggtgaccagtgcctgagagtgaagaacatgctaccaaagtctgtgcaa
atcctgctcttctcagccactttccccgacaaagtcggttcatacgccatgaagtttgcg
cccaatgcccattctctcaagctgcagcgaagcgagcttaccgtcaagggcatttcacaa
atgttcatcgactgcgcggacgacaacatcaagtacgacgttctttgcaagctctacggt
ctgatgactattggacagtcggtcattttcgtcaagacccgtgaaagcgccaacgagatc
cagagacgtatggtggctgatgggcacaaagtatctgctctgcacgctgcgtttgatggt
aacgagagagacgagctgctgagtaaattccgacaaggcgagaacaaggttctcatcacc
actaatgtccttgcccgtggtattgacgtgtctaccgtgtccatggtcatcaactacgat
atccctatgaaaggccgaggcgatagtgagcccgacgccgagacttatctccaccgtatt
ggccgaactggacgttttggacgtgttggtgtcagtatcagcttcgtctacgataagaag
agctacgatgccctcctcggcattgccaacacatacggcattgatcttgtacgccttgat
accgatgactgggatgaggcggaagagcgagtcaaggaagtcatcaagaagaacagagct
caggctgcttatgccccgagcgctacggataacgccaaggcatcctag
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