KEGG   Trichoderma atroviride: 25782706
Entry
25782706          CDS       T10217                                 
Symbol
TrAtP1_005374
Name
(RefSeq) uncharacterized protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
tatv  Trichoderma atroviride
Pathway
tatv03040  Spliceosome
tatv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tatv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    25782706 (TrAtP1_005374)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    25782706 (TrAtP1_005374)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tatv03041]
    25782706 (TrAtP1_005374)
   04121 Ubiquitin system [BR:tatv04121]
    25782706 (TrAtP1_005374)
   03400 DNA repair and recombination proteins [BR:tatv03400]
    25782706 (TrAtP1_005374)
Enzymes [BR:tatv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     25782706 (TrAtP1_005374)
Spliceosome [BR:tatv03041]
 Complex B
  Other components
   Prp19 complex
    25782706 (TrAtP1_005374)
 Complex C
   Prp19-CDC5 complex
    25782706 (TrAtP1_005374)
Ubiquitin system [BR:tatv04121]
 Ubiquitin ligases (E3)
  U-box type E3
   25782706 (TrAtP1_005374)
DNA repair and recombination proteins [BR:tatv03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    25782706 (TrAtP1_005374)
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40 WDR55 Beta-prop_WDR5 Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd B-prop_COPA_B_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_Aladin Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N Beta-prop_HPS5 WD40_RFWD3 V_ATPase_I_N NBCH_WD40 PEP5_VPS11_N zf-Nse
Other DBs
NCBI-GeneID: 25782706
NCBI-ProteinID: XP_013944846
UniProt: G9NRM1
LinkDB
Position
3:join(465865..465877,465975..466019,466085..466520,466580..467037,467107..467582)
AA seq 475 aa
MLCGISGEAPQEPVASKKSGVVYEKRLIEQYINEHGAEPNGEVITADDLLPIKSSRIPRP
RPPTLTSIPALLATFQNEWDNLALETYNLREQLARTREELATALYQHDAAVRVIARLTKE
RDEARDSLSKVTVTDGAAAGEDMVVDSVELLPEELAAQVDQTHQSLSKSRKKRPVPEGWV
SADEVSSFEPTTINSLPVPQATSLDLEGSYAVAGGLNGEAAIYSIEADNVERTVPVNEPV
TDTLWSGSKVFFATSQGNIKVYEAGNEIGTMSEHAGAASGLSLHPSGDLLASVGTDKSIV
FYQLETMKRVSRAYADASLTTCAFHPDGHLFAAGTVNGDIKLYMTKTLEQAVVFKLGAPV
QAIVFSENGFLLAATAKGQTSVTIFDLRKEGDAAVSKVLETGGSVQSLAWDYSGQFLATG
GATGITVQQYTKSSKKWSEPLRNSVAAIAVRWGESGKKLVSLNGEGVVSVLGVKN
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgctttgcggaatctccggagaagctccccaagagcctgtcgcgtccaagaagtcgggc
gttgtatacgaaaaacgactcatagagcagtacatcaatgaacatggcgcagaacccaac
ggcgaagtcataacagccgacgacttgctgcccatcaagtcttctcgcatcccccgaccc
cgaccccctactctgacatcgattcctgcactccttgccacatttcaaaacgaatgggac
aaccttgccctggagacgtacaacctgagagagcagttggcacggacgagagaggagctt
gccacggccttgtaccagcacgatgccgccgttcgcgtcattgcccggctgacaaaagag
agggatgaggccagagactcgctgagcaaagttaccgtaacagacggtgccgcggccggc
gaggacatggttgtggatagtgttgagctgctgccagaagagctggcagcacaggtggac
caaacacatcagagcctatccaagagccgcaagaagcgccccgtcccagagggctgggtt
tctgccgacgaggtgtcctcgtttgagccgacaacaatcaactctttacctgtcccacag
gccacatcactagatctcgagggcagctatgcggtggcgggcggattgaacggcgaggcg
gccatctattctatcgaggcggacaacgtggagagaaccgtgcctgtcaatgagcccgta
acagatactctgtggtccgggtcaaaggttttctttgccaccagtcagggaaacatcaaa
gtctacgaggctggcaacgagattggcaccatgtctgagcacgctggagctgccagtggc
ctgagcttacatccttctggagacctgcttgcgtcggtgggcactgacaagagcatcgtg
ttttaccagctggagacgatgaagcgagtcagtcgagcatatgccgatgcctctttgact
acatgcgctttccaccctgacggacatttattcgccgcgggcactgtcaatggagacatc
aagttgtacatgaccaagacgcttgagcaggccgtggtattcaagctcggtgccccggtt
caggccattgtcttttccgaaaatggcttcctgctggcagccacagccaagggacagacc
agcgtcaccattttcgacctgcgcaaagagggagacgcggcggtttccaaggtgctcgag
acgggcggctcagtgcagtcgctggcctgggactattcaggccagttcctggcgacgggc
ggagcgacgggcattaccgtccagcagtacacaaagtcgagcaagaagtggagcgagccg
ctgcgcaactctgtggctgccattgcggttcgctggggcgagtcgggcaagaagctggtt
tctctcaacggagagggtgtggtgagcgtgcttggcgtcaagaactaa

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