KEGG   Trichoderma atroviride: 25782842
Entry
25782842          CDS       T10217                                 
Symbol
TrAtP1_004856
Name
(RefSeq) uncharacterized protein
  KO
K15542  polyadenylation factor subunit 2
Organism
tatv  Trichoderma atroviride
Pathway
tatv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tatv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    25782842 (TrAtP1_004856)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tatv03019]
    25782842 (TrAtP1_004856)
Messenger RNA biogenesis [BR:tatv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     25782842 (TrAtP1_004856)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_Aladin ANAPC4_WD40 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SCAP PEP5_VPS11_N Beta-prop_WDR35_TULP_N eIF2A Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_WDR11_2nd WD_LRWD1 Nucleoporin_N Beta-prop_ACSF4 PAN2_N VPS11_N MIB_HERC2
Other DBs
NCBI-GeneID: 25782842
NCBI-ProteinID: XP_013938885
UniProt: G9P657
LinkDB
Position
2:join(6054639..6054717,6055113..6055228,6055282..6056136)
AA seq 349 aa
MAYEPRGDYGDRGGGQDGAFMKVRGRRPVTDYSASVLHWMRDRAPNYRGGYTGERERPSA
SYIVDMIPPAGRPVFPADSIPAKHLHSSLNKIKHPINVVRWTPEGRRLLTASTSGEFTLW
NGTGFNFETIMQAHDSAIRALEYSHSDDWLISGDHDGVIKYWQPNFNNVKSINAHTDPIR
DLAFSPNDSKFVTASDDSTLKIFDFALGQEELKLEGHGWDAKSVDWHPTKGLIISGSKDH
LVKLWDPRTARALTTLHSHKSTITKVLFEKKLGRCFATSARDQTARVFDLRMMRDIVLLK
GHEKDISTLTFHPIHANLLSTGGMDGSLFHYMLDTPNPPGRPAPDCRPL
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggcctatgagcctcgtggagactatggcgatcggggtggtggccaggatggcgcattt
atgaaagtacgaggccgaagacctgtgacggactatagtgccagtgtcctccattggatg
cgagaccgcgcccccaactacagaggcggctacacgggtgagagggagcgtccaagcgca
agctacattgtggatatgattccaccggcaggacgaccagtgttcccggctgattctatc
ccggccaagcacctccattcttctctgaacaagatcaaacaccctatcaatgtcgttcga
tggaccccagagggacgcagactgctcacagcttcgaccagcggcgaattcactctctgg
aacggcactggcttcaattttgagactattatgcaggctcacgattccgccatccgagcc
ctggaatactcacatagcgacgactggttgatctcgggtgaccatgatggagtcatcaag
tactggcagccaaattttaacaacgtcaagagtatcaatgctcatacagatcccatccgg
gaccttgcattcagccccaacgactccaagtttgtcaccgcctcggacgactccactctc
aagatcttcgactttgcccttggccaggaagagctgaagcttgaaggccacggctgggat
gccaagtctgtggactggcaccctacaaaaggattaatcatttccggatccaaggatcac
ctggtcaagctttgggaccctcgtactgcgcgagccctgactactctccatagtcacaag
agcacaatcaccaaggtcctgttcgagaagaagctcggtcggtgttttgcgacctctgca
cgagaccagacagctcgtgtctttgacttgcgaatgatgcgcgacattgtgctattgaaa
ggccatgaaaaggacatttcgaccttgactttccatcccatacatgccaacctcctctcc
acgggtggcatggacggttcattgttccattacatgctagatacaccaaatccccccggc
aggccagcccctgactgtcgccccttatga

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