Trichoderma atroviride: 25783004
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Entry
25783004 CDS
T10217
Symbol
TrAtP1_004452
Name
(RefSeq) uncharacterized protein
KO
K06100
symplekin
Organism
tatv Trichoderma atroviride
Pathway
tatv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
25783004 (TrAtP1_004452)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tatv03021
]
25783004 (TrAtP1_004452)
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25783004 (TrAtP1_004452)
Transcription machinery [BR:
tatv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
25783004 (TrAtP1_004452)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
25783004 (TrAtP1_004452)
U7-dependent histone pre-mRNA processing factors
25783004 (TrAtP1_004452)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
25783004
NCBI-ProteinID:
XP_065968388
LinkDB
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Position
2:join(4966048..4967224,4967318..4967448)
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AA seq
435 aa
AA seq
DB search
MSRAQCVWWPSSLTVPGGKDHWSPSRKMDMMSSARGLKPPKSGSPPLGPGPHSLADVFTL
IGNDGLKFFDASQVPHSLVARIAVNTLSRLDPQVLAKAVDGVRGRLEMLNNNPPPELNPN
TAPLGVEEDEDDYEPDFYQAEDTEQILNKLDNAPAPAAAEPKISFDDTLGLKSFSLPQPQ
QLTPEMALNAGSGTVTRVLDMMKSLDEPSVKKQKAGFNRLAASSESRDSWMTILARLATR
SSAGLQEILVKGEADESTQAPSLNNSIREILYNYIMEDFRNHIDVAVSWLCEEWYNDKVQ
MKAGGDHPMYYEKCTLRLIDGFLPYLRPQDKVLTRFLSEIPELNRAILSRVKHMCRDPSV
TQLALTSLLYLVIMRPPIKEAALDVVQDIWTDYEDARTMAAKYLTKYRPLFIENATKRES
NGSPASAPGGDAITA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggcacaatgcgtatggtggccgagctctttgacggtgccgggcggaaaagac
cactggagcccaagccgcaagatggatatgatgtcaagcgcccgcggattgaagcctccc
aagtccggatccccccccttgggcccaggtccccatagcctggccgatgtctttaccctc
attggcaacgatggactcaagttcttcgacgcctctcaggttccccacagcctcgtagcc
agaatcgctgtgaatactttgtctaggctggatccccaggtcctagcaaaggctgtagat
ggtgttcgcggccgactggagatgctcaacaacaaccctcctccggagctgaatccaaac
actgctcctctcggcgttgaagaagacgaagacgactatgagccagacttttatcaggct
gaggatacggagcagattttgaacaagttggataatgcgccggcacctgctgcagccgaa
cctaaaataagcttcgatgatacccttgggctgaagtctttcagccttccccagccacag
cagctgacgccggagatggccctcaacgcgggcagtggaacagtgacaagagtgttggac
atgatgaagtcactggacgagccgagtgtaaagaaacaaaaggctggtttcaaccggctt
gcagcaagctccgagagcagagactcctggatgaccatcttggcgcggttagcaacacga
tcatccgctggtcttcaggaaatattagtaaagggggaagcggacgaatcgactcaggca
ccatccctcaacaacagtattcgagaaatactttacaactacatcatggaagactttcga
aatcacatcgacgtcgcagtatcatggctctgcgaagaatggtacaacgacaaggtgcag
atgaaagctggcggagaccatccgatgtactacgagaagtgcacgctccgactcattgac
ggatttctcccttacctacgcccgcaggataaggttctcactcgtttcctgagcgagata
cccgagctgaatcgagcgattctctctcgtgtgaagcacatgtgccgagatccgagtgtg
acacagctggcattgactagcttgctgtacttggtgattatgcggcctcccatcaaagaa
gctgcgctggacgttgttcaagatatatggacagactatgaggatgctaggaccatggca
gccaagtatcttaccaagtaccgaccgctattcatagaaaatgcgacaaaacgcgaaagt
aacggtagtccagcatcagcaccaggtggagatgcaatcaccgcatag
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integrated database retrieval system
