Trichoderma atroviride: 25783301
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Entry
25783301 CDS
T10217
Symbol
TrAtP1_012612
Name
(RefSeq) uncharacterized protein
KO
K13210
far upstream element-binding protein
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25783301 (TrAtP1_012612)
03041 Spliceosome [BR:
tatv03041
]
25783301 (TrAtP1_012612)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
25783301 (TrAtP1_012612)
Spliceosome [BR:
tatv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
25783301 (TrAtP1_012612)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_2
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
25783301
NCBI-ProteinID:
XP_013943873
UniProt:
G9NU60
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All DBs
Position
7:complement(join(1859166..1859296,1859369..1859516,1859577..1860958,1861019..1861067))
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AA seq
569 aa
AA seq
DB search
MAESARPDIQSILAALASQRPPSSTSNQTPPAATGAYPAPPAGAPPASYQPPPPGVASFP
GSSALPAPASSGNVDLSALRPVNSGTMNFDDIISKARAFATEKGITPYDRPLVYGSDSRN
SDRPYRRSRSRSPPRGGNEYHNNGSSYRDDRRGGQGREYGRDRSYSPPSRGRTFSPRSGS
GRERSPLRGGDDNSETIQIESSLVGLIIGRQGENLRRIEADTNCRVQFLAATDGGPFRQC
KITGPRARRAEVKTAVNRIIEDSGMGALNRAQEKPRDPARGGAAALRDGEDHMQIMVPDR
TVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGSREAAARAKDFIMEIVD
SDSRGDGPASGTKKPAGASRNDGPPRDYTGGGGGGGSGGGGAADKITDAIYVPSDAVGMI
IGKGGETIREMQNVTGCKINVAQSSGPGEVQREIALVGTRESIAQAKLAIDEKVDAVRQK
SSGGGGGGRGRGPQDDRPSYTHQGPDSSTNQPPQTSSSDGTDPYAQYGGYQNYVALWYQS
LMYQQQQQGGQGTPPSGGPPAGALPPGAQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctgcccgccccgatatccagagcattctggccgcgcttgcttcccagagg
ccaccatcgtcgacctccaaccagacacctccggcagcaaccggcgcatatccagcgccg
cctgctggtgcgccgccggcatcgtatcaacctccgccaccaggtgtcgcgagcttcccc
ggtagctctgcactgcctgctccggcgtctagcggcaatgtcgacctgagcgccctccga
cctgtcaactcgggaactatgaactttgacgacatcatctcgaaagcgcgagcctttgcg
accgagaagggcatcacaccctacgaccgcccgcttgtctacggctcagactctcgaaac
tcggatcgaccctaccgtcgatccaggtcgcgatctcctccgcgaggcggcaacgaatac
cacaataacggcagctcatatcgcgatgatcgccgcggaggacagggtcgagagtatggc
cgcgatcgttcttattcgcccccatcacgtggccgcaccttttcgcctcgtagtggcagc
ggccgcgaaagatctcctctgagaggaggcgacgacaactctgagactatccagatcgag
tccagcttggttggcttgattattggccgccagggtgagaatctgcgaaggattgaggcc
gacaccaattgtcgcgtgcagttcctggcagctactgatggcggcccattcagacagtgc
aagatcactggcccgcgcgctcgtcgcgctgaagttaagacggccgtcaatcgcatcatt
gaagacagcggaatgggagccctcaaccgcgcccaagaaaagcctcgcgatcccgccaga
gggggggcagcagctttacgagatggcgaagaccatatgcaaatcatggtccccgatcgt
actgttggcctcatcatcggccgaggaggcgagactatccgcgacctgcaggagcgatct
ggctgtcacatcaacattgttggtgaatcaaagagtgtcaacggcctacgacccgttaac
ctcattggtagccgtgaagctgctgcccgggccaaggatttcatcatggagattgtcgat
agcgacagccgaggcgatggcccggcctctggtaccaagaagcctgctggtgcttctcgc
aacgatggacctccaagagactacactggaggcggcggtggcggcggcagcggcggcggt
ggcgctgctgacaagatcactgatgcgatatatgttccatctgatgcagtaggtatgatt
atcggcaaaggaggcgaaaccattcgagagatgcaaaacgtcacgggctgtaagatcaat
gtagcgcaatcatcaggccctggtgaagttcaacgagagattgcactcgttgggacacgg
gaaagcatcgcccaggccaagctagcaatcgacgaaaaagtagatgcggtgcgacagaag
agtagcggtggtggtggtggcggccgtggccgtgggcctcaagatgaccggccaagctat
acccaccaaggccctgattcctctactaaccagcctcctcagacttcttcaagcgatggc
acagatccatatgctcaatatggcggttatcaaaactacgtcgctctctggtaccaatca
ctgatgtaccagcagcaacaacagggaggacaaggaactcctccctccgggggccctcct
gccggtgctctccctcctggagcccagtaa
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