Trichoderma atroviride: 25783418
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Entry
25783418 CDS
T10217
Symbol
TrAtP1_008406
Name
(RefSeq) uncharacterized protein
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
tatv Trichoderma atroviride
Pathway
tatv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
25783418 (TrAtP1_008406)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tatv03032
]
25783418 (TrAtP1_008406)
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25783418 (TrAtP1_008406)
DNA replication proteins [BR:
tatv03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
25783418 (TrAtP1_008406)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
25783418 (TrAtP1_008406)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
HHH_5
XPG_I_2
5_3_exonuc
TPR_8
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
25783418
NCBI-ProteinID:
XP_013942209
UniProt:
G9NZQ6
LinkDB
All DBs
Position
4:complement(join(3194389..3196621,3196682..3196829,3196919..3196931))
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AA seq
797 aa
AA seq
DB search
MGVSGLLPILKSIQRPTELKKFNGETLAVDGYGWLHRAAYSCAPELAQGKPTKKFINAAL
HRVRMLKHFGVTPYMVFDGDYLPSKAATEESRAKKREEKLKIANEYLKAGKSSQAVQEFQ
KCIDITPEMASALIQELKKMDIPYVVAPYEADAQLVYLERMGLVGGILSDDSDLLVFGAK
RLLTKLDQYGNCIEINRRDFCACREISLTGWSDAEFRRMAIMSGCDYLNGLPGVGLKTAY
RLLRKSKSPERIVRMLQFDGKRISENYLTLFYQAELTFLHQWVFCPAKKELVHLTELDAN
RTAEEMPFIGSYVEPEMARKIASGDVNPITKLPITLPVSPSKRRHSQLATPTETRPQSKP
INSYFKGHHRIPMGEMDANCFSVDPQRISQITAGGAVPRVFPLPRPYIPGSQQSGQSGED
SANSHQTTQAAPRTEPRLNRRRTEPLANLLASVSNSQPPQTEASTRPPKKARLCDDSFDV
EADGSPKTSRFFPANKKKVAKKDPRKTKSEAYLLSDDSLDEALNNLPDIEGWASGALSKK
RVSIFADKPKGPPPSQPESINQQDSTQMDATPRDSSQPKASQQELGQQQEAGQRETSQQK
ISEQETSQVSSASQDTGLTSLEAGQQNPIDTPESSVDDSVALPKPLSPISETIRTPPRPS
LNRFAYSSKSSATPASRSSQYSSVFTPASTTSTAPSTARARQTPLQRMGAWALKGPASSP
SLPASRKDVGKGLGAKGAVNPALVPLPKVDLSEMEALNKPCGSEDQIIPDSDGEEEDEDE
EAKLPTKKLNLAQFAYS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtatcagggctgctaccgattctcaagtccatccagaggccaacagagctgaag
aagttcaacggagagacgttggctgttgacggctatggatggctgcaccgcgccgcgtac
tcatgtgcccccgagctggcccaaggcaagcctactaaaaaatttatcaatgcggctttg
catcgagtaagaatgctaaagcactttggcgtcacgccctacatggtatttgatggcgac
tatctccctagcaaagctgctaccgaagaatctcgtgccaaaaagcgagaggaaaagctc
aagattgccaatgaatacctcaaagctgggaaatcctctcaggcagtgcaagagttccaa
aaatgcattgatattacgccggagatggcgtccgccctgatccaagagttgaagaagatg
gatatcccatacgtggtggccccctacgaagccgatgctcagctcgtttatctcgaacgc
atgggcttagtcggaggcattctttcagacgattcagatctgctcgtttttggtgccaag
cggctacttaccaagctggatcaatacggaaattgcatcgagatcaaccgacgagatttc
tgtgcctgtcgtgaaatctctctgaccggctggagtgacgcagagtttcgacgaatggcg
atcatgagcggctgcgattatctcaatggccttcctggagtaggacttaaaacagcatac
cggctactgcgaaagtccaaatcaccagagcggattgttcgcatgttgcaattcgatggg
aagcgcatatcagagaattacctgaccttattctatcaagccgaactcacatttttacat
caatgggtgttttgccccgcgaagaaggaacttgtccacctcacagaactagatgcgaat
cgtacagcggaggagatgcctttcatcggatcctacgtcgaaccagagatggctcgcaaa
attgcaagtggcgacgttaatcccattacaaaacttccaattaccctgcctgtctcgccg
tccaaacgaaggcactctcagctcgctacgcctaccgaaacccgtccacagtccaagccc
atcaattcatatttcaaaggccatcatcggatacccatgggcgagatggacgccaactgt
ttctccgtcgatccccaacgaatttcgcaaattaccgccgggggagctgttccacgcgtg
tttccattaccgaggccttatatacccggatcgcagcagtcagggcagtcaggggaagac
agtgcaaactctcatcagacaacacaagccgctccacgaacagagcctcgcttgaatcga
cgacgaacagagccgctcgcaaatctgttagccagtgtctcaaacagccaacctccccag
acagaggcttccaccaggcccccgaagaaggcccgcctgtgtgacgattcgtttgacgtg
gaggcagatggctcgcccaaaacgagtcgatttttccctgctaataagaaaaaggtcgcc
aaaaaggatccgcggaagacaaagagcgaggcttacttgctttcagacgattcccttgat
gaagccctcaataatttacctgatattgaagggtgggcgtctggggctctgtcgaagaaa
agggtatcaatctttgctgataaaccaaaggggccgcctcctagccagcctgagagtatc
aatcaacaagattccactcagatggatgcaacacctcgagatagtagccagccaaaggcc
agccaacaagagctcggccagcagcaggaagccggccagcgggagacaagccagcagaaa
atcagcgagcaggagactagccaagtttcaagtgcaagccaagacacaggactcacttcc
ctagaagccggccaacagaaccctattgacacacccgagtcttcagtcgatgactcggtg
gctctcccaaaaccactttcccccatatccgaaaccatccgtacccctcctcgtccaagt
ttaaaccgctttgcctactcttccaaatcgtcggctacaccagcttcaagatcctcgcaa
tactcatccgtgttcactcccgcatctactacctccactgcaccatccacagcccgggca
agacagacgccccttcaacgcatgggagcgtgggcattgaagggcccggcatcatctcca
agtctccccgcgtcacgaaaggatgttggtaaaggccttggtgctaaaggggcggtcaat
cctgcgcttgtccctcttcccaaggtggatttgagtgagatggaggcgttgaacaagcca
tgcggaagcgaagaccaaatcatccccgatagcgacggggaggaagaggacgaggatgaa
gaggccaagctcccaaccaaaaagctcaatctcgctcaattcgcctactcttga
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integrated database retrieval system
