Trichoderma atroviride: 25784036
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Entry
25784036 CDS
T10217
Symbol
TrAtP1_008922
Name
(RefSeq) uncharacterized protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
tatv Trichoderma atroviride
Brite
Enzymes [BR:
tatv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
25784036 (TrAtP1_008922)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
25784036 (TrAtP1_008922)
mRNA cycle factors
Common to processing body (P body) and stress granule
25784036 (TrAtP1_008922)
Spliceosome [BR:
tatv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
25784036 (TrAtP1_008922)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
25784036 (TrAtP1_008922)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
25784036
NCBI-ProteinID:
XP_065970192
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Position
4:complement(join(4631399..4631787,4631874..4632365,4632436..4632873,4632931..4633124,4633172..4633428))
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AA seq
589 aa
AA seq
DB search
MAVPEEGSVVETGDQAAPVGWVERTAFDYTAMAEAETAATWDGNARVYQWKDEYGDVGPA
FEELEVELFGDPESRRDRQTGLDFSKIEQIEVIQEGPQRIEYIKTFADAGIHPVMLRNIE
LCGYEVPTPIQKFTIPAILQGYDVIGVAQTGSGKTAAYLIPILSKLMGKAKKLGAPRPNP
ARFQEGVDNVIAEPLVVVVVPTRELAVQIFNEARKLCYRSMLRPCVVYGGVPVREQGGLL
SRGCDILIGTPGRLKDFIGRPEVLSLRRLKYMIIDEADEMLNDDWESELQAILSGAEQDV
GNVYYGLFSATFPKAARDLAKKYLCDSHVRFRVGRAGSTTENIKQMIVEVSREGKNETLL
TLLEEMNGVRTIIFVNSRQAADTLDDFLFNMKLPVTSIHSDRTQVEREAAMRAFRSGQAP
ILVATGVTARGIDVRNVMHVINYDLPSIEYGGIEEYTHRIGRTGRIGHRGVATSFFTERD
EPLASVLTRTLLETNQDIPDFLQAYIPENWSSGTKVKFETESDFDPNDVAGAGEGCGDEG
GGWNTADNVQGDSGGGWGNSGGNDANEAANASGGGWGADAAQPAAGAGW
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccagaagaaggatcggtcgtggagactggagatcaggctgctcccgttggc
tgggtcgagcgcacggcattcgactacactgcaatggctgaggccgaaacagctgccacc
tgggatggaaacgccagagtttaccagtggaaggatgagtatggagatgtcggtccagct
tttgaagaactggaggtagaactgtttggagatcccgagtcccgtcgggatcgccagact
ggcctcgatttttcaaagatcgagcaaatcgaggtcatccaagaagggcctcaacgtatc
gagtacatcaaaacgtttgcggatgcaggcattcatccagtaatgttgagaaacattgag
ctctgtgggtatgaggtgccaactccgatccagaagttcacaatcccagctatccttcag
ggatacgatgtgattggtgtagctcagactggttctggaaagactgccgcgtatcttatc
cctatcctaagcaagctcatgggaaaagcgaagaagttgggtgctccccggccaaacccc
gccagattccaagagggagtcgacaacgtgatcgcggagccacttgtcgttgtcgttgtc
cctacccgtgaattggcggtgcagatcttcaatgaagcccgcaagctctgctaccgctcc
atgctccgaccttgcgttgtctacggaggagttcctgtccgcgaacagggcggccttctt
tctcgaggctgcgacatcttgattggaactcctggtcgtctcaaagatttcatcggacgt
cccgaagtcttgtctctccgccgcttgaagtacatgatcattgacgaggctgacgagatg
ctcaacgatgactgggagtctgaacttcaggctattctctctggtgcagagcaagacgtg
ggaaatgtctactatggcctcttctctgccacctttcccaaggctgcgcgagaccttgcg
aagaagtacttgtgtgattcacatgtgcgcttccgagttggtcgtgccggcagcaccaca
gagaatatcaagcagatgattgtcgaagtcagccgagaaggcaagaatgaaactcttctg
actctgctcgaagagatgaatggtgttcgtaccatcatctttgtcaacagtcgtcaagct
gccgacacgcttgatgactttttgttcaatatgaaattgccggtcacttccatccatagt
gaccgcacacaggttgagcgagaagctgctatgcgagccttcagatctggccaggctccc
attctcgtcgcgactggcgtgacggcccgcggcatcgatgtccgcaacgtcatgcacgtc
ataaactatgacttaccatcgattgaatatggtggtattgaggagtacacgcatcgaatt
ggtcgcaccggtcgtattggtcaccgaggtgtcgcgacctcattcttcacggagcgtgat
gagcccctagcgagtgtactcacgaggactctgttggagactaatcaggatattcctgat
ttccttcaagcctatatcccggagaattggtccagtggaaccaaggtcaagtttgaaacc
gaatctgacttcgacccaaatgatgttgcaggtgccggtgagggatgtggcgatgagggt
ggaggatggaacacagctgataacgtccaaggcgattctggcgggggctggggcaactcc
ggaggaaacgatgctaacgaagctgccaatgcttctggaggcggctggggagccgacgcc
gctcaaccagctgctggagctggctggtaa
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