Trichoderma atroviride: 25784270
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Entry
25784270 CDS
T10217
Symbol
TrAtP1_012584
Name
(RefSeq) uncharacterized protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tatv01009
]
25784270 (TrAtP1_012584)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25784270 (TrAtP1_012584)
04131 Membrane trafficking [BR:
tatv04131
]
25784270 (TrAtP1_012584)
03036 Chromosome and associated proteins [BR:
tatv03036
]
25784270 (TrAtP1_012584)
Enzymes [BR:
tatv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
25784270 (TrAtP1_012584)
Protein phosphatases and associated proteins [BR:
tatv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
25784270 (TrAtP1_012584)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
25784270 (TrAtP1_012584)
Membrane trafficking [BR:
tatv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
25784270 (TrAtP1_012584)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
25784270 (TrAtP1_012584)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2-like
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
25784270
NCBI-ProteinID:
XP_013943719
UniProt:
G9NU29
LinkDB
All DBs
Position
7:complement(join(1768984..1769300,1769356..1769527,1769584..1769676,1769740..1769803,1769861..1771410))
Genome browser
AA seq
731 aa
AA seq
DB search
MEPEDQIMGDSDVAITNGHSEGLRLDNDDTASESAYHEESEPSVIEDTIARLRVRRGLLP
TGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKKMGLVYTGPESELPRIMKDCPT
KYMWRIPARPATREEICLAHSPEHLAWVEGLDTISTAELRELTRRFDQGRESLYVGSMSY
PAALLSVGGAIETCKCVVTEQVKNAFAVIRPPGHHAEFDQPMGFCFFNNVPVAIRVCQQD
YPEQCRKVLILDWDVHHGNGTQNIFYQDPNVLYISIHVYQNGMFYPGKPPNPMTPDGGIE
HCGTGPGLGKNINIGWHDQGMGDGEYMAAFQKIVMPIAKEFNPDLVVISAGFDAADGDEL
GGCFVTPACYAHMTHMLMSLADGKVVVCLEGGYNLQAISSSAVAVARTLMGEPPPKLALP
KINKEAARTLAKVQAYHAPYWECMRSGIVDVPDVQSLNANRLHDVIRNAQRQVMQSKHGM
IPLYIQRELISKSFENQVLVTPNLHNAQKIIVIIHDPPQLLAQLDVIDTTVDAHNSWVVD
GVMEYIDWAVSQNFGVMDINVPAYVTHEEDIDSYIPEFNEKEIQEQILSLVCYLWDNFLQ
LYETDEIILLGVGNAYLGVKVLLINRDCREKIAGIVNFVTGNLRPVKSDTDNELSSWYKE
NSRVYVAGDHACWSDPDLTRKVHRRRFGTVVRSKMFGLNHMMREHAEEAHEWIMKRVTNG
PEGDTTEEEKS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgaggaccagatcatgggagacagcgatgtggccatcaccaacggccatagt
gaaggactacggttggacaatgatgacacagcgtcggaaagcgcatatcatgaagagagc
gagccgagtgtcatagaggacacgattgcccggctgcgtgtgcggcgtggcctgctcccc
acgggctgctgctacgatgatcgaatgaagcttcatatgaatgcagactttagtccgaat
acgcatcacccggaagacccccgccgcatccatgagatattcaaggctttcaagaaaatg
ggactcgtctacacgggaccagagtcagagctgcccaggatcatgaaagactgtccgaca
aaatacatgtggaggatccccgcccgaccagctacacgagaagagatctgcctcgcacat
tctccagagcacctggcttgggtggagggcctcgacacgatcagtacggctgagcttcgt
gaattgaccaggcgatttgaccaaggccgcgagtctctgtatgtaggcagcatgtcctac
cctgctgccctactgtccgtgggtggtgctatcgaaacctgtaaatgcgttgttacagaa
caagtcaagaatgcttttgctgttatccgaccccctgggcaccatgctgagtttgatcag
cccatgggtttctgtttcttcaacaacgtcccggtggctattagggtatgccagcaagat
tatcccgaacagtgtcgcaaagttctcattctggattgggacgttcatcacggaaacggt
actcaaaatatcttttaccaagatcccaatgttctctatatatcaatccatgtctatcag
aatggcatgttttacccaggcaaaccaccaaaccccatgacacctgacggcggtattgag
cactgcggcaccggtccaggattgggcaagaacatcaacatcgggtggcatgaccaaggc
atgggagatggtgaatacatggccgcattccaaaagattgtaatgcccattgcaaaggag
tttaacccagacttggtagtcatctcagctggattcgatgctgccgatggagatgaactg
ggcggctgctttgtgacgcctgcttgctatgcccacatgacacatatgctcatgtcactt
gcagatggcaaggtcgttgtctgcttagaaggtggctataacctacaggcaatttcaagt
tctgcggtagccgttgcgaggaccttgatgggagagcctccgccaaaactggctctcccc
aagatcaacaaggaggctgctagaacgttggccaaggtgcaagcataccacgctccgtac
tgggaatgcatgcgttctggaatcgttgatgttcctgatgttcagtcgctcaatgctaac
aggcttcacgacgtcatcaggaatgcgcagcgccaggtgatgcagtccaagcatggcatg
ataccactctatatacaacgagagttgatctcgaaatcgtttgagaaccaagttttggta
acgccaaatctacacaacgctcaaaagattatcgtcattatacatgatccgcctcaatta
ttagcacagctagatgtgatagacaccacagtggatgctcataattcatgggtggttgac
ggggttatggaatatatcgactgggccgtttctcagaatttcggagtcatggatatcaac
gtcccagcatatgttacacatgaagaggacattgattcgtacattcccgaattcaacgag
aaagagatccaggaacagatcttgtcactggtttgctatttgtgggataactttctccag
ctctatgagactgacgaaatcatcctgcttggcgtcggcaatgcctatcttggagtcaag
gttcttttgataaacagagactgcagagaaaagattgcgggcattgtcaactttgtgact
ggaaatctacggcccgtcaaatcggacacggataacgagctctcatcctggtacaaggag
aattcacgggtctatgtggcgggcgaccatgcctgctggtccgatccggatttgaccaga
aaagtccacaggaggcgattcggaaccgtggtgcgcagcaagatgtttggactgaaccac
atgatgagagagcatgctgaagaggcccatgagtggatcatgaagagagtcacgaatggt
cccgaaggagacactacggaagaggaaaaatcttga
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