Trichoderma atroviride: 25784504
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Entry
25784504 CDS
T10217
Symbol
TrAtP1_005854
Name
(RefSeq) uncharacterized protein
KO
K12587
exosome complex component MTR3
Organism
tatv Trichoderma atroviride
Pathway
tatv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
25784504 (TrAtP1_005854)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25784504 (TrAtP1_005854)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
25784504 (TrAtP1_005854)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
25784504
NCBI-ProteinID:
XP_013944422
UniProt:
G9NS36
LinkDB
All DBs
Position
3:join(1863179..1863226,1863308..1864048)
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AA seq
262 aa
AA seq
DB search
MRLRVASEHLMPSGLSISRRGVTPSASGSAYLEIEPREGEHGSGMKLTCTVHGPRSLPRS
APFSPYMVLSTHVKFAPFATKQRRGYIRDSSEKDLSTHLETALRGALIADRWPKSGVDIV
VTIIEGESTRQDAVERRVEEWDVMNVLGGCITVASAAIADAGIDCVDTVSGGVAALVASK
DGDDASIVLDPVALEHESILAACCVAYLPNRDEVTNLWFKGQLPSSASYNHQSLVSRAVQ
ASRGTHGLISASLSEAISSTQS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttcgcgtcgccagcgagcacctgatgccatccggcctctctatctcaagacgg
ggggtaacgccctcagcatccggctcagcctatctcgagattgagcccagagaaggagaa
cacggctcaggcatgaaattgacgtgcaccgtccatggacccagatcccttccacgctct
gctcccttctcgccctacatggtgctctcaacccatgtcaagtttgctccatttgccacg
aaacagcgtagaggctatattcgtgactccagcgaaaaggatctcagcacacacctggag
actgctcttcgcggggccctgattgctgaccggtggcccaagagcggcgtcgacatcgtg
gtcacaatcatcgagggggagtcaactcggcaagacgcggtggagcggcgagtcgaggaa
tgggacgtgatgaacgttttgggcggatgcattactgttgcttctgcagccattgccgat
gcagggattgactgcgtcgacactgtttctggaggagtagctgcgctggtggcgagcaag
gatggcgacgatgcctcgatagtgctggaccctgttgcgctggagcacgaatccattctg
gctgcttgctgcgtggcatatctgcccaacagagatgaagtcaccaatctctggttcaag
ggccagctaccctcgtctgcttcatacaatcaccaatcactagtttcaagggcggtgcag
gcgagcagaggaacacatgggttgatttcggcgtctttaagcgaagccattagcagtact
caaagctag
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