Trichoderma atroviride: 25784606
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Entry
25784606 CDS
T10217
Symbol
TrAtP1_007419
Name
(RefSeq) uncharacterized protein
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
tatv Trichoderma atroviride
Pathway
tatv04120
Ubiquitin mediated proteolysis
tatv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
25784606 (TrAtP1_007419)
04120 Ubiquitin mediated proteolysis
25784606 (TrAtP1_007419)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tatv03110
]
25784606 (TrAtP1_007419)
04131 Membrane trafficking [BR:
tatv04131
]
25784606 (TrAtP1_007419)
04121 Ubiquitin system [BR:
tatv04121
]
25784606 (TrAtP1_007419)
Enzymes [BR:
tatv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
25784606 (TrAtP1_007419)
Chaperones and folding catalysts [BR:
tatv03110
]
Other chaperones and cochaperones
Others
25784606 (TrAtP1_007419)
Membrane trafficking [BR:
tatv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
25784606 (TrAtP1_007419)
Ubiquitin system [BR:
tatv04121
]
Ubiquitin ligases (E3)
U-box type E3
25784606 (TrAtP1_007419)
Multi subunit type E3
STUB1-CHIC2 complex
25784606 (TrAtP1_007419)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_17
TPR_19
TPR_11
TPR_16
TPR_9
TPR_14
CHIP_TPR_N
ANAPC3
TPR_12
TPR_BSK1_C
TPR_20
zf-Nse
Motif
Other DBs
NCBI-GeneID:
25784606
NCBI-ProteinID:
XP_013948331
UniProt:
G9NGD0
LinkDB
All DBs
Position
4:complement(join(581540..581713,581782..582331,582557..582657))
Genome browser
AA seq
274 aa
AA seq
DB search
MSRSLQLSLQLKEEGNHLFQAGNYIGADGVYSKAIIVDPKNPALYTNRAMARLKLGDWES
VITDCQTCLGLAPQNMKAHYYLAQAQLSIGDFDSALNNALAAHKICATMNDKSLGAITNI
VLRCKKDRWEDREKKRLRQERELEEEMLAMLVRDRNDMLKAESDETERSIIADEADEKMK
TLSKVFENARQQSLKRREVPDWAIDDISFAIMVDPVVTKTGKSYERATIMEHLRRHPSDP
LTREPLSDAELRPNLSLRQACADFLEENGWAVDW
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggtccctgcaactgtccctgcagctcaaggaagaaggcaatcacttgttccag
gccggcaactatatcggcgcagatggcgtctactctaaggccatcatcgtcgaccccaaa
aacccagcgctctacaccaaccgcgccatggcccgcctcaagctcggcgactgggaatcc
gtcatcaccgactgccagacctgcctcggcctcgccccccagaacatgaaggcccactac
tatctcgcccaagcacagctctccattggcgactttgacagcgccctcaacaacgccctg
gccgcgcacaagatttgtgcaaccatgaatgacaagtcgctcggcgcaatcacaaacatt
gtcctgcgctgcaaaaaggatcgctgggaggacagggagaagaagaggctgcggcaggag
cgggagctggaggaggagatgctggcgatgctggtcagggaccgcaacgacatgctcaag
gcggagagcgatgaaactgagcggagcatcattgcggatgaggcagatgaaaagatgaag
actctcagcaaggtctttgagaatgccagacaacagagcctgaagcgacgtgaagtccct
gactgggcgattgacgacatcagcttcgccatcatggttgatcccgtcgtgacaaaaact
ggcaaatcatacgagcgcgccaccatcatggagcatctccgccgccatccttccgatcct
ctcacccgcgaaccgctcagcgacgccgagcttcggcccaatctctcgttgcgccaggcc
tgcgctgactttttggaagaaaacggctgggctgtggactggtag
DBGET
integrated database retrieval system
