Trichoderma atroviride: 25784930
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Entry
25784930 CDS
T10217
Symbol
TrAtP1_010874
Name
(RefSeq) uncharacterized protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tatv Trichoderma atroviride
Pathway
tatv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
25784930 (TrAtP1_010874)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tatv03021
]
25784930 (TrAtP1_010874)
03036 Chromosome and associated proteins [BR:
tatv03036
]
25784930 (TrAtP1_010874)
Transcription machinery [BR:
tatv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
25784930 (TrAtP1_010874)
Coactivators
SAGA/TFTC/STAGA complex
25784930 (TrAtP1_010874)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
25784930 (TrAtP1_010874)
STAGA complex
25784930 (TrAtP1_010874)
TFTC complex
25784930 (TrAtP1_010874)
SAGA complex
25784930 (TrAtP1_010874)
SLIK complex
25784930 (TrAtP1_010874)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
TFIID_NTD2
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_IFT140_1st
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
LisH
Beta-prop_TEP1_C
Beta-prop_VPS8
Tricorn_2nd
eIF2A
Beta-prop_EIPR1
Beta-prop_Nup120_160
ARMC9_LisH
Motif
Other DBs
NCBI-GeneID:
25784930
NCBI-ProteinID:
XP_013947786
UniProt:
G9NIL6
LinkDB
All DBs
Position
6:join(752262..752411,752733..752915,752973..753778,753836..754958)
Genome browser
AA seq
753 aa
AA seq
DB search
MAAQVPAQGAGAANSYGGQPVTSPAGPPAATTTTAGTTGGAMSNQNLNQIVTDYLLKRGF
NRTEEVFRQESKHLGNDGKPVQQLANLGPKKYSRAFRLLRDWVENNLEIYKFELSKLLWP
TFVYSFIELVGNGYTEEGKVFLREIGQHFQASHADDLKIFATITLAQHVNENPVTKLYKE
NKYRIPLNQHATGDLFNFLERESDHGGSVIRQLLVTYCQIDSTARGPITPFSFEAVFRKS
KSLEIEEIDAREGIPGVNIGLSNKDILDPAAPLSLGPLPMDADLRDDVRAEIEDEERRLP
PPLGGPSLIEEFDRKIKREESADAPNRSDLPLPPSRPRDIMLEMQKLRENRDRFKIEGRT
GGVGVPVSACMFTFHNTFGSVSCMEFSDDGQLAAVGTSESYIRVWSLDGKALPSSNAHEK
GTKFNSRKLIGHYGPVYDISFSDSASGPPQKLFGDEGRQNAAIDGRPKLLLSCSGDGQIR
LWSLESWTCLCVYKSHDGPVHRALWSPHGHYFLTGGYDKVVRVWMQDHASPQRLLVGHDT
AISAIAWHPNGMYVFSASDETDKSIRMWSVTTGACVRVFTGHTEYISALECSPNGKILAS
ADIAGNIFFWDLVKGTRIKRSRGHGKGGIWSLSFSVESNVLASGGQDGTVRLWDVESPAD
PHKAAQQAGLEAATAGADMAINGPNGEASRINAGTSGQSAATGAATGTKKKSKEVMITPD
QISAFPTKKTPVTRVKFTRMNLVIAGGCYDADR
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaagtaccggcccagggagctggtgcggccaactcgtatggaggacagcca
gtaacgtcgccagccgggccgcctgccgcaaccaccaccaccgcaggcacgactggaggc
gcaatgtcgaatcagaatctcaatcagattgtcacggactatcttctcaaaaggggcttc
aacagaaccgaagaagttttccgacaagagtcaaagcatctcggcaatgatggtaaacca
gtgcaacaactagcaaacttgggccccaaaaaatattcaagagcgttccggttactaaga
gattgggttgaaaacaatcttgaaatctacaaatttgagctatccaaacttctttggcca
acgttcgtgtattcctttatcgagctagtcggaaatggatacacagaagaaggcaaagta
tttcttagagaaattggccaacatttccaggcatcacacgctgatgatttgaaaatattc
gcaacaattacactcgctcagcatgtaaacgagaatcctgttaccaagctgtacaaggag
aataagtaccgcattcccttgaatcagcacgccactggcgacctttttaattttcttgag
cgagagtctgatcacggtggatccgttatccgacaacttcttgtcacgtattgtcaaatc
gattcaacggctcgtggacccatcaccccctttagcttcgaggcggttttcagaaagtcc
aagagtctagagatcgaagagattgacgccagagaaggcattcctggagtcaatatcgga
ttatccaacaaggatatcttggacccggctgcaccccttagcctaggccctctgcctatg
gatgcagatctccgcgatgacgtccgcgctgaaatcgaagacgaggagcgacgacttcca
ccgccccttggcggacctagtctgatagaagaatttgatcggaaaatcaagagggaagag
agtgcggatgctccaaacagatcagacctacccttaccgccgtctcgaccacgcgatatc
atgcttgaaatgcaaaagctacgagagaatagagacagattcaagattgaagggcgaaca
ggcggcgtcggcgtccctgtaagcgcttgcatgtttacgtttcacaacacctttggaagc
gtttcatgcatggaattttctgatgatggacagctcgcagctgtcggtaccagtgaatcc
tacatccgcgtttggtctctggatggcaaagccctcccaagctcaaacgctcacgaaaag
ggcaccaagttcaacagccgaaagcttatcggacactatggacccgtatacgatatttca
ttttcagactcagcctcgggaccccctcaaaagctctttggtgatgagggccgacaaaac
gcagccatcgatggacgaccaaaactactgctatcatgttcaggagatggacaaattcgg
ctctggtccctggaatcctggacttgcctctgcgtatacaaatcacacgatgggcctgtc
catagggcactgtggagccctcacggacattactttttgactggtggttatgacaaggtt
gttcgagtttggatgcaggatcacgcatcaccccaacggctccttgtcggccacgatacc
gcaatctcggccattgcatggcaccctaacggcatgtacgtcttttcagcctcagatgag
acggataagtcgatccgcatgtggtccgtaacgactggtgcctgtgtaagagtattcacg
ggccacacggagtatataagcgctctggaatgctctcccaacggtaaaatcctggccagc
gcagatattgcgggcaacattttcttctgggatctagtcaagggaactcgcatcaagcgt
tctcgcgggcatggaaaaggaggcatctggtctctcagttttagcgttgaatccaacgta
ctcgcatccggcggccaagacggcactgttcgattgtgggacgttgagtcgccagcagat
ccgcacaaggcagctcaacaggccggtcttgaggctgcaactgcgggtgctgacatggcg
atcaacggccccaacggagaggcatcacggatcaacgcggggacctcgggtcagtcagct
gctacaggtgcagctaccggtaccaagaagaagagcaaggaagtgatgattactcccgat
caaatatcggcctttccaacgaagaagacgccagtgacaagggtcaaatttactcgaatg
aatctcgtcatagctggcggatgctacgatgctgaccgatag
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integrated database retrieval system
