Trichoderma atroviride: 25785352
Help
Entry
25785352 CDS
T10217
Symbol
TrAtP1_004787
Name
(RefSeq) uncharacterized protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tatv03009
]
25785352 (TrAtP1_004787)
Enzymes [BR:
tatv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
25785352 (TrAtP1_004787)
Ribosome biogenesis [BR:
tatv03009
]
Eukaryotic type
Pre-60S particles
Helicases
25785352 (TrAtP1_004787)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
ATP11
Motif
Other DBs
NCBI-GeneID:
25785352
NCBI-ProteinID:
XP_013939687
UniProt:
G9P5E9
LinkDB
All DBs
Position
2:complement(join(5892051..5893760,5893833..5893910))
Genome browser
AA seq
595 aa
AA seq
DB search
MGFKQMTPVQAATLPQFLGNKDVVVEAVTGSGKTLAFLIPIVQRLLRLAEPTKKHHVSAI
VISPTRELAAQIHTVLLSLLEFHAPSAEILPHLKGEDKRPSSAVPAIVPQLLVGGTTTPA
QDLSYFVRHSPNLLISSPGRLVELLASPHVHIDQSFEALVLDEADRLLDLGFKQDLQTIL
SHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEVKVKMKDGGGIVEDRKIPASLQMSY
LVTPASQKLPALAQLLERLPIRPLKSIVFLSTCAAVDYFQHTLPQILPEGFSLVPLHGKH
PAKVREKNFGRFLSSVSPTILLTTDLAARGLDIPQVDLVVQIDAPSDPKVFIHRSGRAGR
AGRKGLAVVMLHPGHEEDYARFLEIRQTPITPLLKPSISVTEDGARDATSKIRTLLQSDR
AIHDKAQKAFVSWVRSYAAHQATSIFRVSDLDWADLGNAWGLLRLPRMPELRTWNGDKML
GVEMDWDEFAYKDKAREQARREAMAADTSGETAKRAADAKRKRKNNEAWSGKQEQEEHRT
ERREKRHKKTEAKKLATMTDDEKVKQAELNDLIRRVREENLAKAAKEDEEFEGFD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgggatttaagcagatgacaccagtgcaggctgcgactctgcctcagtttctggggaac
aaagatgtggtagttgaggctgttactggtagtggaaagacattagccttcttgattccc
attgtacaacgattattgcgcctcgcagagcccacaaagaagcaccatgtcagcgcaatc
gtcatctcacctaccagagagctcgccgcccagatccatacggtcctcctctccctcctc
gagttccatgcgccatctgccgagattctaccacacctcaaaggcgaagacaagaggcct
agcagcgcagtgcctgccattgttccccaattgctagtcggaggaaccaccacgcccgcg
caagatctcagctacttcgtccgacacagtccgaatcttctcatatcctccccaggccgt
ctcgtcgagttgctggcctcgccccatgtccacatcgaccagtccttcgaagcacttgtc
ctcgacgaggctgatcgactgcttgatctcggcttcaagcaggacctccaaacgattctt
tcacatcttcccaagcagaggcggacgggcctattcagtgccagtgtcagtgaagctgtt
ggcgagattatccgcgtcgggttgcgcaacccggtgaagattgaagtcaaggtgaagatg
aaggatggtggtggaattgtggaagacagaaagattcctgcaagtcttcaaatgtcatat
ctggttactccggctagccagaagctgcctgccttagcgcagttgctggaacgcctacct
atacggcctctcaagagcattgtctttctgtctacttgcgccgccgtagactactttcaa
cacactcttcctcaaatattgcccgaaggcttttcgctagtacctctacatggcaagcat
ccagctaaagtacgcgaaaagaactttggccgctttttatcttcggtgtctcctacaatt
ttattgacaacagacttggccgctcgcggtttggacatcccgcaggttgatttggttgtt
cagattgatgccccatccgaccccaaagtattcatacacagaagtggaagagctggtcgt
gcaggcagaaaaggcctggccgtggtcatgctgcacccaggacacgaggaagactacgcc
agattcctagagattcgccaaaccccaatcacaccactattaaaaccttcaatctccgtg
acagaagatggagcccgagatgcgacatcaaaaatccggacactacttcaatcagacaga
gcgatccacgataaagcccagaaagcttttgttagctgggtacgaagttatgcagcgcat
caagcgacatccattttcagagttagcgatctggattgggcagatcttggaaacgcatgg
gggcttcttcgcctgcccaggatgcccgagctgagaacttggaacggagacaagatgctg
ggggttgaaatggactgggatgaatttgcctacaaggacaaggcacgggagcaggccaga
cgagaggccatggcagctgatacgagcggagagacggcaaagagagctgctgatgccaag
cggaagaggaagaacaacgaggcctggagcggaaagcaagagcaggaagagcaccggacc
gagagacgcgagaaacggcacaagaagacggaggctaagaagctggcaacgatgacggat
gatgagaaggtcaagcaggctgagctgaacgacttgatccggagagtcagggaagagaat
ctggcgaaagcagcaaaggaagatgaagagtttgaagggtttgattag
DBGET
integrated database retrieval system
