Trichoderma atroviride: 25785526
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Entry
25785526 CDS
T10217
Symbol
TrAtP1_005830
Name
(RefSeq) uncharacterized protein
KO
K03504
DNA polymerase delta subunit 3
Organism
tatv Trichoderma atroviride
Pathway
tatv03030
DNA replication
tatv03410
Base excision repair
tatv03420
Nucleotide excision repair
tatv03430
Mismatch repair
tatv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
25785526 (TrAtP1_005830)
03410 Base excision repair
25785526 (TrAtP1_005830)
03420 Nucleotide excision repair
25785526 (TrAtP1_005830)
03430 Mismatch repair
25785526 (TrAtP1_005830)
03440 Homologous recombination
25785526 (TrAtP1_005830)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tatv01009
]
25785526 (TrAtP1_005830)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tatv03032
]
25785526 (TrAtP1_005830)
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25785526 (TrAtP1_005830)
Protein phosphatases and associated proteins [BR:
tatv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
25785526 (TrAtP1_005830)
DNA replication proteins [BR:
tatv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
25785526 (TrAtP1_005830)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
25785526 (TrAtP1_005830)
MMR (mismatch excision repair)
DNA polymerase delta complex
25785526 (TrAtP1_005830)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
25785526
NCBI-ProteinID:
XP_013944500
UniProt:
G9NS58
LinkDB
All DBs
Position
3:complement(join(1810152..1810327,1810380..1811213,1811267..1811472,1811530..1811585,1811661..1811714))
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AA seq
441 aa
AA seq
DB search
MDDTKKYLSDRLLSEEVPVTYRLLSRALNLRVNVAKQKLHEFYESQNASKANSIHATYLI
YGSKTEDREPETGDADMDGSAPEPEPLSDYAPTRTVTIVAEEGLKDALAEYEQVTSMHVY
SLSPFPQRDLVQLSDVSKSLSEYRKVEDAAKMLETYGLIANPKARKKDRKGRTPVSVPVS
VPSAPKAAKQEAQSATPKPSQAEKVKQETREAPSADSTPSSSAGKKPPASLKRGSSGGIM
QSFARAAAKPPKPKPETKPKDEDTSMALSDDGEADEEDLPGSKSIDMEALKRTRKEREEQ
LLRMMEDPEDEAEGKEEAKKGDEQSDEEMEEASEPEPEAEPEPEQPKEDKEPAEVISNSS
NGRRRGKRRVMKKKRILDDQGYMVTIQEAAWESFSEDEAPPPATKPTPTATPASSTQKSK
KAAPAAKSGSQGNIMSFFSKK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaccaaaaaatacctctccgatcggctcctgagtgaggaggtgccggtgaca
tatcgtctgctaagcagagcgctcaaccttcgggtgaatgttgctaaacaaaaactacat
gaattttatgagagccagaatgcttccaaagcaaattctattcatgctacctacctgatt
tatggatccaaaacggaagaccgagagccagagactggcgatgctgacatggacggctca
gcacctgaacccgaacctctctctgactatgcacccaccagaacggtcaccatagtagcg
gaagaaggcttaaaagatgcgttggccgaatatgaacaagtcacatcgatgcatgtttac
agcctgtcccccttccctcagagagacttggtgcagctatctgacgtctcaaagtcactg
tctgagtatagaaaggttgaagatgctgcgaaaatgctggaaacatatggattaatcgcg
aatcccaaagcccgcaagaaggaccgcaagggccgcactccagtttcagtcccggtctct
gtcccaagcgcacctaaagctgccaagcaggaggcacaatcggctacgcccaaacctagt
caagcggaaaaggtcaaacaagagactagagaagccccatctgccgattctaccccatca
tcgagtgctgggaagaaacctcctgcgtcgctaaaaagaggttcttctggaggcattatg
cagtccttcgctagggcggcggcgaaacctcccaagccaaagcctgaaacgaagcccaag
gatgaagataccagcatggcattatccgacgatggtgaagctgacgaagaggatctgcct
ggctccaagtcaatagacatggaagcattgaaacggacaagaaaggagcgtgaagagcag
ctcctacgtatgatggaagatccagaagatgaagcagagggaaaagaagaggccaagaag
ggagatgagcaatcagatgaggaaatggaagaggcctctgagccggagcctgaagcagag
cctgaacctgaacagcctaaagaggataaagagcctgcagaagtgatatcgaattccagt
aatggccgccggagaggcaagcggcgagttatgaagaagaagcgcatattggatgatcag
ggatatatggtaactatccaggaggctgcatgggagtccttctctgaagatgaagctcct
ccaccagccaccaagccgacgcctacggcaacacccgcctcatcaacacagaaatcaaag
aaggcagcgcccgccgcgaagagtgggagtcaaggcaacatcatgtcattcttctcaaag
aagtga
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