Trichoderma atroviride: 25786445
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Entry
25786445 CDS
T10217
Symbol
TrAtP1_000726
Name
(RefSeq) uncharacterized protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tatv03016
]
25786445 (TrAtP1_000726)
Enzymes [BR:
tatv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
25786445 (TrAtP1_000726)
Transfer RNA biogenesis [BR:
tatv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
25786445 (TrAtP1_000726)
Prokaryotic type
25786445 (TrAtP1_000726)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
25786445
NCBI-ProteinID:
XP_013946205
UniProt:
G9NM81
LinkDB
All DBs
Position
1:join(1915052..1915167,1915234..1915321,1915375..1917390)
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AA seq
739 aa
AA seq
DB search
MSELPHYNVRQTASHAKSIGITQRATPLRFPWVGDLRVRFSDFQVNEIGKDGVVVHLRKI
GLNGQNKPVADAAPVKGADTPKEQQDSTNEGDSNEVKDEPQEQEIVEIPAEDVTALSNLA
GEKFAQELVDLFRDGQAAPLERKKPVVSEPMDDKFKRGEIHQEIRRIFNSRIETSTGDAG
AIVASFAAPTRRGKRGRGGRNRNRNKQEDQPIGEYLHFTLFKDNRDTMDAVNQIARILKV
KPQVINYAGTKDRRASTVQRCSVRYTRDRSLAGINGKLWGITTGDYEYKTDPIHLGQLLG
NEFAITIKNCQILGEDSAKPVPEQADLMHANVQSALDHMTEHGWINYFGHQRFGTHQIGT
HEVGKLILGDNYEGAINAILAYDEEIAQKAETEGIPNEPAKRDEYNRHLACMLFRTEKDV
EKAIEIMPRRFAAEVCVLRHLNRQGKQSRRDFVGALIHITRGLRSMYLHACQSHVWNHAA
SRRWELHSEKVIKGDLVIVETEATPQVSGQDQDGDDIINPVNPVEDDDDIPLQARPLTEE
EAASGKYTVYDIVLPTPGYDVIYPDNEIGEFYKDFMGREENGSLDPHKMRRMRREFSLPG
RYRKLMNRFLAKPSVEFKTYSDDEEQMHPTDLDLIKADRKTGTHASNNKRSREDGDDARP
SKVAKVEGENEASNQTSQEEGAAASAKVEETETTNAQESMEVDKPLKIAAIVKFQLGRSA
YATVTLRELMGDPPESNAS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactgccgcattacaatgtgcgccagactgcgtctcacgccaaatcaatagga
atcacgcagcgcgccactcctttgcgattcccatgggtgggcgacctgcgcgtgaggttc
tcagatttccaggtcaatgagattggcaaagacggcgtcgttgttcatctgcgcaaaatc
ggattaaatggccaaaacaaaccggttgcggacgccgcgccggtaaagggggctgatact
cccaaagagcaacaagactccactaacgagggtgattccaacgaggttaaagatgaacct
caagagcaggagattgttgagatccccgcggaagatgtgacagctctcagcaatctagca
ggcgaaaagtttgcacaagagctcgtagacttattccgagacggtcaggccgcgcctttg
gagagaaagaagcccgtcgtgtccgagcccatggacgacaagttcaaacgaggcgaaatc
catcaagaaatccgacgcatcttcaattctaggatagagaccagcacgggcgatgccggt
gctatcgtcgccagcttcgcggcacccacacgaaggggcaaaagaggtcggggcggccgc
aatcgcaaccggaacaagcaagaagatcagcctatcggcgagtatctccactttactctt
ttcaaagacaaccgcgataccatggatgccgtcaaccagattgcacgcatcttgaaggtg
aagcctcaagtcatcaactatgcgggcaccaaggatcgacgtgcatctacagtccagcgc
tgttccgtccgatacacgcgggatagaagcctggcgggtatcaatggaaagctctggggc
ataacgactggcgattacgagtacaagacggatcccatccaccttggacagctactaggc
aatgagtttgccatcactatcaagaattgccagattctcggcgaggacagtgccaagcct
gtccctgagcaggctgacttaatgcatgccaacgtgcaatctgctttggaccacatgaca
gagcacggctggatcaactactttggccatcagcgattcggcacccaccagatcggaacg
cacgaggtcggaaaacttattctgggggataactacgaaggcgccatcaatgccattctt
gcatacgacgaggaaattgctcaaaaggcagaaacagaggggatccccaacgagccggcc
aagcgagacgaatacaaccgccaccttgcctgcatgctgttcaggaccgaaaaggacgtc
gaaaaggccattgaaatcatgcccaggagattcgcggccgaagtctgcgtcctgcgccac
ctcaacagacaaggcaagcagtccagaagagactttgtcggagccctcatccacatcacc
agaggtctgcgatcaatgtacctccacgcatgccaatcccacgtgtggaaccacgccgcg
agcaggcgatgggagctccatagcgagaaagtcatcaagggcgacctcgtcattgtcgaa
accgaagccactccccaagtcagcggccaagatcaagacggcgacgacatcatcaatccc
gtaaaccccgtcgaggatgatgacgatattcctctccaggccaggcctttgaccgaggag
gaggccgccagtgggaaatatacagtgtacgacattgttctccctactcccggctacgac
gtcatctacccagataacgagattggcgagttctacaaagacttcatgggccgcgaggag
aacggcagcctggatccccacaagatgcgccgcatgcgccgcgaattcagccttccggga
cgctaccgcaagctgatgaacaggttcctcgccaagcccagcgtcgagttcaagacgtac
tcggacgacgaagagcagatgcaccccaccgatttggatctcatcaaagccgatcgcaaa
accggtactcatgctagtaataataaacgctcccgtgaggacggagatgacgcgaggccg
agcaaggtggccaaggtggaaggagaaaacgaagcgtccaatcagacctcacaggaggag
ggtgctgctgccagcgccaaggttgaagaaacagaaactacaaacgcacaagaatccatg
gaggtggacaagccgctcaagatcgccgcaattgtcaaattccagctcggcagaagcgcc
tacgccaccgtcacgctgcgggaactcatgggtgaccccccggagagtaatgcatcctaa
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