Trichoderma atroviride: 90959458
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Entry
90959458 CDS
T10217
Symbol
TrAtP1_004208
Name
(RefSeq) uncharacterized protein
KO
K14306
nuclear pore complex protein Nup62
Organism
tatv Trichoderma atroviride
Pathway
tatv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
90959458 (TrAtP1_004208)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
90959458 (TrAtP1_004208)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
90959458 (TrAtP1_004208)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
FliJ
ATG17_like
PI_PP_I
MIP-T3_C
MRS2-like
Motif
Other DBs
NCBI-GeneID:
90959458
NCBI-ProteinID:
XP_065968291
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Position
2:complement(join(4269931..4270119,4270178..4272076))
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AA seq
695 aa
AA seq
DB search
MFSTPNSSGAAPNSTTSTAPAGGGLFGNAAATSGAPKFSFGNATTTPATNPPGSLFGGQN
AAAAPKPAGGLFGGAAAASSSATPATAAGGLFGGASTTPATGGMFGGATTTAAASTTPAT
GGLFGNTKTSTAAPAAGGLFGNKPASTTPSTGGLFGNNASQTPSTATAPALGLFGNKPAP
AAQPTTPTTAAGATTPARPLFAQSTTPAGAPPANPAKPAGGNLFGTAASTAPAAGGLFGA
ARPAAASTATTQPAATTTSGSGLFGGGAQSATSGLFGNKPAATTTPATKPAAGGLFGNTA
ASTAQPAASTAAAAPASAGTTNSLFGAKPAATTAPAAAAGGGLFGTAAPTTTSAASASTP
APAAAGGLFGLKPAGTAATTTSSAAPTTTAAAGGLFGTTSQAPAATAKPATSLFGTATPQ
PAATTATTTAAPAAGTTTAGAGGLFGAKPAGDKDAAKPAAQTTTTSALGASTNGPPSQMA
RLKNKTMEDIVTRWASDLSKYQKEFKDQATIVSNWDRNLVDNGEKIQKLYLDTFEAERAS
HEIERQLAAVESQQEELEAWLNRYESEVQDMFSKQMGPGEQLGGPDQERERTYKLAEKLT
QQLDEKSRDLSKMVKEINEISGTLSKGAKAEDPLSQIVRVLNGHLTQLQWIDANASALQA
KVTAAQKSSSNLGSHYGSGESDVAESFYRSYMGRR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaactccgaactcttcaggtgccgcgcccaacagcacaaccagcactgcgccg
gccggtggaggattgtttggcaatgctgctgctacgtctggagcgcccaagttttccttt
ggtaatgcaacaacaactcccgctaccaaccctccaggatctcttttcggaggccagaac
gctgccgctgcaccaaaacctgctggaggtctctttggtggagctgctgctgcttcttca
tctgctactccagccactgctgctgggggtctatttggaggagcctcaaccacaccggcg
acaggcggcatgtttggcggcgcgaccactacagcagcagcctctaccacaccggcgact
ggtgggctatttggcaacacgaaaacaagcactgcagcaccagccgctggcggtctgttt
ggcaataaacctgcatcgactactccttcgactggtggcttgttcgggaacaatgccagc
cagacaccaagcactgcgacagctccagctctaggcttgtttggaaacaagccagctcct
gctgcccaaccgactaccccgaccactgctgctggagcgacaacacctgccagaccatta
tttgcacaatcgacaacgcctgccggcgcgccccccgcaaacccagccaaacctgcgggt
ggcaatttgttcggaaccgctgccagcactgctccagctgctggcggtttgtttggagct
gccaggcctgctgctgcctcgactgcgacaacgcaacctgcggccaccactacatcagga
tcaggactgttcggcggtggagcccaatcagccacgagtggtctatttggcaacaagcct
gctgctaccactactcccgctaccaaaccggctgctggaggactctttggcaataccgct
gctagtactgcgcagcctgcagcctctacagccgccgcagcgccggccagtgctggaacg
acgaattctctctttggagctaaacctgccgccactacagccccagcagcagcagctggc
ggaggcctctttggtaccgctgctcctaccacaacctctgcagcttcagcatctactccg
gcacctgctgctgcaggaggtctctttggtctgaagcctgctggcactgctgctacgact
acatcttcagcagctcctacaacaactgccgcagctggtggcctgtttggcaccacttct
caagctcctgctgccaccgccaaacctgctacctcactgttcggtactgccacgcctcag
cctgccgcgaccacggctactacaacggcagcaccagcggccggcacgactactgctggt
gcgggtggcctattcggagccaagcccgctggtgacaaagatgcggcgaagcccgccgct
caaacaaccaccacaagcgcattgggcgcgtccaccaatggacctccatctcagatggcc
cggctgaagaataagacgatggaggatattgtcactcgatgggcctcggatctatcaaaa
taccaaaaggagttcaaggaccaagccactattgtgtccaactgggacagaaatttggtg
gacaatggtgaaaagatccagaaactgtatctggatacctttgaagcggagcgagcgagc
catgagattgagcgccaactcgctgccgtggagagccaacaagaggagctggaggcctgg
ctgaaccgatacgagtcagaggtccaagacatgttttccaagcagatgggccctggtgaa
cagcttggaggaccggaccaggagcgtgagcgcacctataagttagcggagaagctcaca
caacaactcgatgagaagtcgcgagacctatccaagatggtcaaggagatcaacgaaatt
tctggaacattgagcaagggagccaaggctgaggatccactgagccagattgttcgcgta
ctgaacggccatcttactcaattgcaatggattgacgccaacgcctcagctctacaggcc
aaggtcacggccgcgcaaaagtcgagcagcaacttgggtagtcactacggtagcggagag
agcgacgtggcggagagcttctacagatcctacatgggacggaggtga
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