Trichoderma atroviride: 90960226
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Entry
90960226 CDS
T10217
Symbol
TrAtP1_007865
Name
(RefSeq) uncharacterized protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
90960226 (TrAtP1_007865)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tatv03041
]
90960226 (TrAtP1_007865)
Enzymes [BR:
tatv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
90960226 (TrAtP1_007865)
Spliceosome [BR:
tatv03041
]
Complex A
U2 snRNP components
U2 related factors
90960226 (TrAtP1_007865)
Complex B
90960226 (TrAtP1_007865)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
90960226
NCBI-ProteinID:
XP_065969778
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Position
4:complement(1700482..1702719)
Genome browser
AA seq
745 aa
AA seq
DB search
MISNRQRPPRSPLKKASVTKKKQEPEAYFSEDDYAFEDQADPNADALLTIASKRKKKDIP
SVDYSKIDLQPIRKNFWVEPAELNTLSEADVTDLRLELDGIKVNGKDVPKPVQKWAQCGL
TRQTLDVISSLGFEKPTPIQMQALPSLMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEP
LKDGDGPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGGAPIRDQIAELKRGAEII
VCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILF
SATMPRLIDSLTKKVLKSPIEITVGGRSVVAKEIEQIVEIREESTKFVRVLELLGELYDK
DEDARSLLFVERQEKADDLLKELMQKGYPCMSIHGGKDQVDRDSTISDFKKGVVPILIAT
SVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTPEQENCAPGIAK
ALEQSDQPVPERLNEMRKSHREKVKSGKAKDSSGFGGKGLDRLDQEREAARLRERKTHRA
EGEEEEVKEEGKKEEDDKKIEKTLNAIKAATSTVQSRETAKADSGDSGANKATQPAAATG
GDKAKDPLDKVSSAVSAINSRLGKAGQLRSGQPIDNKGPDAGAFHATLEINDFPQKARWA
VTNRTNVAKILEATGTSITTKGSFYPPGKEVPSGGEPKLYILIEGDTELVVAGALNEMTR
LLREGTIAAADADSRAPASGRYTVT
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgatctcaaacagacagagaccaccaagatcccccctaaagaaggcctctgtgaccaag
aagaagcaggagcctgaagcgtatttctcggaggacgactatgctttcgaagatcaagcc
gaccccaatgcagatgccctgcttacaattgcgagtaaacgcaagaagaaggatattcca
agcgtcgattactccaagatcgacttgcagcctattcgcaagaatttctgggttgaacct
gccgagctgaataccctttctgaagcagatgttaccgatttacgattggagttggatgga
atcaaggtcaatggcaaagacgtccccaagcccgttcagaaatgggcccagtgtggtctt
acccgccaaaccctggatgttatcagctcccttgggtttgaaaagccaacaccaattcag
atgcaagcccttccctcattgatgtctggtcgagacgtcgtcggtgtggccaagacggga
tcgggaaagactatggctttcttgcttcccatgttccgacatatcaaggatcaagagccg
ctcaaggatggcgatggtcccatcgggctcatcatgacgccaacgcgagagcttgccacg
caaatccacagagactgcaagccctttttgaagatgatgaacctgcgtgccgtttgtgcg
tacggtggagctcccatccgagatcagattgctgagctcaagcgtggcgctgaaatcatt
gtctgtactcccggtcgcatgattgatctgctggctgcgaatcaaggaagagtcaccaac
ctcagacgagtgacgtatgtggttctggatgaagccgatcgaatgtttgacatgggtttc
gagccacaagtgatgaaaatctttgccaacatgcggcctgatagacaaaccattctattt
tcagccaccatgccacgcctcatcgactcactcaccaaaaaagtactaaagagtcccatt
gaaattaccgtgggtggccgtagcgtcgttgccaaggaaatcgagcaaattgtcgagatc
agagaagagagcaccaagtttgtgcgtgttctggagctgctaggcgagctctacgacaag
gatgaagatgcccgatcattactcttcgtggagcgacaggagaaggcggatgacttgctc
aaggagctaatgcaaaagggctatccttgcatgtccattcacggaggcaaagaccaagtt
gatcgggactctaccatatcagatttcaaaaagggcgtggtgcccatcctaattgccaca
tcggtcgccgctcgcggtttggacgtcaagcagctcaagcttgttatcaactacgacgca
cccaatcacttggaagattatgtccaccgagccggacgaacgggccgtgcaggaaacacg
ggcacagcagtcacttttgtgacccctgaacaagagaattgcgcacctggtatcgccaaa
gccttggaacagagtgaccagcctgttccggaacgactcaacgagatgcgaaagtctcat
cgtgaaaaggtcaagtcgggcaaggcgaaggactcttccggctttggtggaaagggtctg
gaccgtctggaccaggaacgcgaggctgctcgtcttcgagagcgcaagacacatagagcc
gagggtgaggaagaagaggttaaagaagagggcaagaaagaggaggatgacaagaagatt
gaaaagacactcaacgccatcaaagctgctacctccaccgttcaatctcgcgaaactgcc
aaagccgactcaggagatagcggcgcaaacaaagcgacacaacctgctgctgccacaggt
ggcgacaaggccaaggatcccctggataaggttagctctgctgtcagcgccatcaacagc
cgtctgggcaaagccggccagcttcggtcgggccaacccatcgataacaagggtccagac
gcgggtgctttccatgccacgctggaaatcaacgacttcccgcaaaaggccagatgggcc
gtcaccaatcgtaccaacgtggcaaagattctggaagcgactggaacgtctattacgaca
aagggcagcttttaccctcccgggaaagaagtgccatctggaggagagcccaagctgtat
attcttattgagggtgataccgagcttgtggtggcgggtgctttgaatgagatgacgagg
cttctgagagagggcaccattgctgctgctgatgcagatagcagagcgcctgcgagcgga
agatataccgtcacttga
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integrated database retrieval system
