Trichoderma atroviride: 90961236
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Entry
90961236 CDS
T10217
Symbol
TrAtP1_013023
Name
(RefSeq) uncharacterized protein
KO
K14312
nuclear pore complex protein Nup155
Organism
tatv Trichoderma atroviride
Pathway
tatv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
90961236 (TrAtP1_013023)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
90961236 (TrAtP1_013023)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
90961236 (TrAtP1_013023)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Ints3_N
Phasin_2
Motif
Other DBs
NCBI-GeneID:
90961236
NCBI-ProteinID:
XP_065971863
LinkDB
All DBs
Position
7:complement(join(3128500..3129207,3129267..3130949))
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AA seq
796 aa
AA seq
DB search
MCRRLIFLYGRVETVSTALAVACGHGDSRRGSVKAIDQVTEDRARALFVDFGGQPTIIET
DGSSLTTDSVKLSSRHDALAMYLSRLIRKLWKAPVINASVAPNGAITVSSSIAPTKLITT
QENLERLRKFIDSNKGLIQGMSGPSDLQRVASRQEEVALQAEHQALHALQKLMESISEGI
SFVLMLFDERVSDIYARLDDTSRQQLRDLTYEKLFSQTDGKDLAKLLVKAIVNRNIESGS
NVETVADALRRRCGSFCSPDDVVIFKAQESLKRASEQPPNTNQSRILLNESLSLFQKVAR
SLTFGNLQVAIAQYIDMKYYAGAVQLCLYVAREQDRGNTALMWINDGKPAADPRANAFNE
RRRVYDLIHEVLRHLDAASSMEPLTIDGRPTLIATKRIEAYEVVNGSDDEVFHFDLYEWY
IEQGWTERILGIDSPHVITFLQRLAGTNVEHADLLCRFYTNRSRFFDAAEVQAELASSDF
PLNIKDRLRLLSLAKANANVATVGISRQQQQRLNHEVTDLLEVANIQDDLLGRLLADERI
DGERKIEIEKALDGRIISLSDLFNDYADQAGYYDLCLLIYHTANYRNPTTIASTWDSLIQ
QTHAEIMAKHEATAAGMSLPPLPYEAVTSKIQNIAHHTSLDSFIFPIQTLLPQLCRYAVT
YQQDATIGADPTWPVQLFLSLGVSHDMIVRVLENIFDTQDYGFSGMVRNRIIEIIVYVVN
DWVAEVRRRGGAAKGGLLGPSIGDLLQRCEAALPSAGQGHNDGGANLADIRRVLRMLRRE
VAGLVERLPAGSTRFM
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgccgtctcatattcctctatggccgtgtagagacggtctcaacggctttggct
gtggcctgcggtcatggagactcccggcgaggctctgtgaaggcgattgatcaagtaacc
gaggaccgagcaagagctctctttgtcgactttggtggtcaacctacgattatagaaact
gatggatcatctctcacaacagactcggttaagctgtcatcccggcatgacgcattggcc
atgtacctgtcaagattgatcaggaagctctggaaagcccccgtcatcaatgcaagcgtc
gctcccaacggggcgattaccgtgtcttcatccatcgctcctaccaagctgattactacc
caggagaacctggagcggctaagaaaattcattgattctaacaagggcctcattcaaggg
atgtcgggcccttccgacttacaacgagttgccagccgacaggaggaggtggcgctgcag
gcagagcaccaggcactgcatgcgctccaaaagctgatggagagcatatcagaaggcatt
tcatttgtgctcatgctgtttgacgaacgtgtgtcagacatttatgccagactggacgac
acctctcgacagcaactcagggatttgacctatgagaaactcttctcgcagacggatggc
aaggatcttgccaagctgttggtcaaggccatcgtcaaccgcaacattgagagtggctca
aacgtcgagacggtagcagacgcgctaaggcggagatgcggcagcttctgcagccctgat
gatgtagtcatcttcaaggcccaggagtcgctgaagagagcgtctgagcagccgcccaac
accaatcagtccagaattctcctcaatgagagcctatccctgttccagaaagtagctcgc
agcctgacattcggtaacctgcaggttgccattgcgcagtacattgacatgaagtattat
gctggggctgtgcagctgtgtctctacgttgcccgagagcaggacagaggcaacacggcc
ttgatgtggatcaacgacggcaagcctgcggctgaccctcgcgccaacgcctttaacgag
aggagaagggtttatgatctcatccacgaggttctgcgacaccttgatgccgcctcaagt
atggaaccgctgacgattgacggccgaccaacactcatcgctactaagagaatcgaggct
tacgaggtggtcaacgggtcagatgatgaagtcttccactttgacctgtacgagtggtac
attgagcagggatggaccgaacggatactgggcatcgattctccacacgtcattactttc
ctgcagcggctggcgggcaccaacgtggagcatgccgacctcctctgccgcttctacact
aaccgaagccgcttcttcgatgcagctgaggtgcaggccgagctggccagctccgacttt
ccgctcaacatcaaggaccggctcaggctcctcagcttggccaaagccaatgccaatgtg
gcgactgttggcatcagccgacagcagcagcagcgactgaaccatgaggtgacggatctg
ctggaagttgccaacatccaagatgatcttttgggtcgcctcctggcggacgagagaatc
gatggcgaaagaaagattgagattgaaaaggctctcgatggaagaatcatcagcctttca
gatcttttcaacgattacgccgatcaggcaggatactatgatttgtgcctgctgatctac
cacactgccaactaccgcaaccctaccactattgcatcaacatgggatagcctgatccag
cagactcacgccgaaatcatggcgaaacacgaggcgacagcggccggcatgtcactgcct
cccttgccgtacgaagccgtgacgagcaagattcaaaatattgctcaccacacatcattg
gacagcttcatcttcccgatccagaccctcctgccgcagttatgtcggtatgccgtcacg
taccagcaggatgccaccattggtgccgatcctacgtggccggtgcagctcttcctgtcg
ctgggcgtgtcccacgacatgattgtgcgcgtgctggagaacatctttgacacgcaagac
tatggctttagcggcatggtgcgcaaccgcatcatcgagatcatcgtctacgtggtgaac
gattgggtggctgaggtacggcgacgtggcggcgcagccaagggaggcttgcttgggcct
tccatcggcgacctcctgcaacgttgcgaggctgccctgccgtcggcgggccagggccac
aacgacggcggcgcaaacctggcggatatccgacgcgtgctgaggatgctgcggagggag
gtggccgggttggtggagcggctgccagcagggagcacgaggtttatgtga
DBGET
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