Tateyamaria rhodophyticola: ACERHN_05505
Help
Entry
ACERHN_05505 CDS
T11509
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K17061
two-component system, response regulator AauR
Organism
taty Tateyamaria rhodophyticola
Pathway
taty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
taty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACERHN_05505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
taty02022
]
ACERHN_05505
Two-component system [BR:
taty02022
]
Other families
AauS-AauR (acidic amino acids utilization)
ACERHN_05505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
DUF5955
AAA
HTH_50
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XOL79024
LinkDB
All DBs
Position
complement(812012..813304)
Genome browser
AA seq
430 aa
AA seq
DB search
MTQYRVLIIDDDRLMRNSLVDLIEASGWVAKPLARATDADRWIVQFQPDVILSDVRMPEM
TGLELLQTVEAAPPIVLISAHGDIPTAVEAMNHGAYSFVEKPYDPKRLLLILSHAAAQHR
MQQSNHRLRARVQQLSGLDRVLLGQSPDMHRLRDTITMVAGSQSAVLVQGETGTGKDLVA
RAIHDLSPRCDGPFIAVNAAQVGPDNLPHVARSAGGGTLFLDEICACPADLQPALLRLIE
TGEVLEPGQGAPDHMDLRIVAATNEDPQVAVAEGRLRQDLMFRLDGFTLHLPPLRARPDD
VPLLVLRFLQDFATLYDTATPDLTDRDVATLIAHDWPGNVRELRNVAERHVMMSRLGPRA
IDDAMSGAQTGTDNRTGLREAVAAFERQMISKAIQANAGRMDDTAAALGIGRRTLNEKIV
KLGLDKDALL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaataccgtgttctgatcatcgacgacgaccgactgatgcgcaactcgctggtg
gatctgatcgaagcctcgggctgggtggccaagccgctggcccgtgccacggatgctgac
cgctggatcgtgcagtttcagccggatgtgatcctgtcggatgtgcgcatgcccgagatg
acgggccttgagctgttgcagaccgtggaggccgcgccgccgattgtgctgatctccgcc
catggggatatcccgacggcggtagaggcgatgaaccatggcgcctacagctttgtcgaa
aaaccgtacgatcccaagcgcctgcttttgatcctgtcgcacgcggcggcgcagcaccgg
atgcagcaaagcaatcaccgcctgcgcgcccgggtgcagcagctgtcggggttggatcgc
gtgttgttggggcagtcgcccgatatgcaccgcctgcgcgacacgatcaccatggtcgca
ggcagccagtcggctgtccttgtccagggggaaaccggcaccggaaaggacctggtggcg
cgggccatccacgacctgtcgccccgctgtgacgggccgttcatcgcggtgaatgccgcg
caggtcgggccggacaacctgccccacgtggcgcgcagcgcgggtggtgggacgctgttt
cttgacgaaatctgtgcctgtcccgcggatttgcagcccgccctgctgcgcctcattgaa
acgggtgaagtgttggagccgggccagggcgcacccgatcatatggacctgcgcatcgtt
gcggcaaccaatgaggacccgcaggtcgcggttgccgaggggcggctgcggcaagatctg
atgttccgcctcgacggcttcaccctgcatctgccgcccttgcgtgcgcgtcccgatgat
gtgccgcttttggtgctgcggttcctgcaggacttcgcgacgctctacgacacagctacg
cccgaccttacggacagggatgtggcgacgctcattgcgcatgactggcccggcaacgtg
cgcgagctgcgcaatgtggcggaacggcatgtgatgatgtcccggctgggtccgcgcgcg
atagatgatgcaatgtccggcgcgcaaacgggcacggacaaccgcaccggcctgcgcgag
gccgtcgcggcattcgaacgccagatgatcagcaaggcgatacaggccaatgccggacgc
atggacgacacagccgcagcacttggtatcgggcggcggaccctgaacgagaaaatcgtc
aaacttggtctcgacaaggacgcgctgctctag
DBGET
integrated database retrieval system
