Tateyamaria sp. SN6-1: ACERHN_12065
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Entry
ACERHN_12065 CDS
T11509
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
taty Tateyamaria sp. SN6-1
Pathway
taty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACERHN_12065 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taty03019
]
ACERHN_12065 (pnp)
03016 Transfer RNA biogenesis [BR:
taty03016
]
ACERHN_12065 (pnp)
Enzymes [BR:
taty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACERHN_12065 (pnp)
Messenger RNA biogenesis [BR:
taty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACERHN_12065 (pnp)
Transfer RNA biogenesis [BR:
taty03016
]
Prokaryotic type
tRNA degradation factors
ACERHN_12065 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XOL76638
LinkDB
All DBs
Position
2140710..2142845
Genome browser
AA seq
711 aa
AA seq
DB search
MFNEVKKSMEWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAKQPKPGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGAPFMGPIAGARVGFEDGEYILNPTVDDMQDLRLNPEQR
LDLVVAGTKDAVMMVESEAYELTEAEMLGAVNFAHEQIQPVIDLIISLAEEAAKEPFDYQ
APDYSDLYAAVKAAGEEQMRAAFAIGDKQERTAAVAAARTAILEALTEEQAEDANLGSAM
KKLEASILRGDVVKTGTRIDGRKTDEIRDIVCQNGFLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
PTDFPYTVRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEEDGSYA
ILSDILGDEDHLGDMDFKVAGTENGITSLQMDIKIAGITPEIMEKALAQAKDGRMHILGE
MAKSISGAQEFSVHAPRIETMNVPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGVVKI
ASPNGDSIKKAYEMIHAIVAEPEEGAIYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEIKKEEAAEG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgaagtgaaaaaatcgatggagtggggcgaagagacgctcacactcgaaacc
ggcaaggttgcccgtcaggctgacggctccgtgattgccacgctgggcgaaaccagcgtc
atggcgaacgtgacgttcgcaaaacagccgaaacccggtcaggacttctttccgctgacc
gtccactaccaggaaaaatactacgccgcgggcaagatccccggcggcttcttcaagcgt
gaggcacggcccaccgagaaagagaccctgaccgcccgcctgatcgaccgtccgatccgg
cccctgttcgtgcccggcttcaagaacgaagtccttgttatgtgtacggttttgtcgcac
gatctggtcaacgaccccgacatcgtcgcgatgatcgcggcctctgccgcgctgaccatt
tcgggcgcgcctttcatgggccccatcgccggtgcgcgcgtcggtttcgaggatggcgaa
tacatcctgaaccccacggtcgacgacatgcaggacctgcgcctgaaccccgagcaacgc
ctcgatctggttgttgccggcaccaaagacgccgtgatgatggtggagtcggaagcctat
gagctgaccgaagcggaaatgctgggtgcggtgaactttgcccatgagcagatccagccg
gtgatcgacctgatcatcagcctcgccgaagaagcggccaaagagccgttcgactaccaa
gcacctgattactctgacctttatgccgctgtgaaagccgccggtgaagagcagatgcgc
gccgcattcgccatcggtgacaagcaggagcgcaccgcagcggttgccgctgcccgcacc
gcgatcctcgaggcgctgaccgaagagcaggccgaagatgccaatcttggctctgcgatg
aagaagcttgaggcgtccatcctgcgcggtgacgtcgtcaaaaccggcacccgcatcgac
ggtcgtaaaacggatgaaatccgtgacatcgtgtgccagaacggcttcctgccgcggacg
cacggttcggcgctgttcacccgtggtgaaacgcagggtctggtcgtgaccacgctgggc
accggcgacgacgaacagttcatcgacgccctgcacggcaacttcaaatccaacttcctg
ctgcactacaacttcccgccctattcggtcggcgaagcggggcgcgtgggccctcccgga
cggcgtgagattggtcacggcaaactggcatggcgcgcgcttcaggccgtgctgcctgcg
cccaccgatttcccctataccgtgcgcgttgtgtcggaaatcaccgaatccaacggctcc
agctccatggcgtcggtctgtggcggctcgctgtcgatgatggacgcgggcgtgccgctg
aaatcggccgtggccggtgtggccatgggcctgatcctcgaagaagacggcagctatgcc
atcctgtccgacatcctgggtgatgaagaccacctgggcgacatggacttcaaagtggca
ggcaccgaaaacggcatcacctcgctccagatggacatcaagatcgcaggcatcacgccc
gagatcatggaaaaagccctcgcacaggcgaaagacggccggatgcacatcctgggcgag
atggcgaaatccatctccggcgcgcaggaattctcggtccacgcaccgcgcatcgagacg
atgaacgtgcccaccgacaagatccgcgaagtgatcgggtcgggcggcaaggtcatccgc
gagatcgtcgaagtgtcgggcgccaaggtcgacattaacgacgacggcgtggtcaagatt
gcatcgcccaacggcgactcgatcaagaaagcctacgagatgatccacgccatcgtggcc
gagccagaagagggcgcgatctacaccggcaccgtggtcaagatcgtggatttcggcgcg
ttcgtgaacttctttggcaagcgcgacggtctggtccacgtgtcccagatcgaaaaccgc
cgcctgaaccatccttcggatgtcctgaaggaaggccaggaggtcaaagtcaagctcttg
ggctttgacgatcgcggcaaggtgcgtctgtcgatgaaagtcgtcgatcaggaaaccggc
gaagagatcaagaaagaagaggccgccgaagggtaa
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