Tateyamaria rhodophyticola: ACERHN_12810
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Entry
ACERHN_12810 CDS
T11509
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
taty Tateyamaria rhodophyticola
Pathway
taty03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
taty00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACERHN_12810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taty03021
]
ACERHN_12810
03400 DNA repair and recombination proteins [BR:
taty03400
]
ACERHN_12810
Enzymes [BR:
taty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACERHN_12810
Transcription machinery [BR:
taty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACERHN_12810
DNA repair and recombination proteins [BR:
taty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACERHN_12810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
XOL76779
LinkDB
All DBs
Position
2279887..2280903
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPNQLDVKPGNEPARQATVIAEPLERGFGLTMGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSIAGVREDVTDVILNLKQVSIRMEVEGPKRLSISAKGPGVVTAGDISE
SAGIEILNRDHVICHLDDGADVYMELTVNTGKGYVSAEKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSISPDDAVAFAARILQDQLGIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDNF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggccgaattgatcaagccaaaccagcttgacgtgaaaccgggc
aacgaacctgcgcgtcaggcgactgtgatcgccgaaccgctggagcgtggctttggtctg
accatgggcaacgcgctgcgccgcgttctgctgtcgtcgctgcaaggcgcggccatcacc
tcggtgcaaatcgacaacgtgctgcacgagttttccagcatcgcgggtgtgcgtgaagac
gtgacggacgtgatcctcaacctgaaacaggtgtcgatccgcatggaagtcgaagggccc
aagcgcctgtcgatctctgccaaggggccgggtgttgtcaccgccggtgacatctcggaa
agcgccggcatcgaaatcctgaaccgcgaccacgtgatctgccacctcgatgacggcgct
gacgtctacatggaactgaccgtgaacacgggcaaaggctatgtgtcggcagaaaagaac
aagcccgaagatgcgcccataggcctgatcccgatcgacgcgatctactcgcccgtcaaa
aaggtcagctatgatgtgcagcccacccgcgagggccaggtgctggattatgacaagctg
acaatgaaggtcgaaaccgatggctcgatttcgcccgacgatgccgtggcctttgccgcg
cgcatccttcaggaccagttgggtatcttcgtcaacttcgacgaaccggaaagcgcgtcc
cgtcaggacgacgacgatggcctcgagttcaacccgcttctgctgaagaaagtggatgag
ttggagctgtcggtgcgttcggccaactgcctcaagaacgacaacatcgtctacatcggc
gatctcatccagaagaccgaagcagaaatgctgcgtacgccgaactttggccgcaagtcg
ctgaacgagatcaaagaagtgctgtcgggcatgggtctgcaccttggcatggatgtcgag
gattggccgccggacaatatcgaagatctggccaagaagttcgaagacaacttctga
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