Tateyamaria sp. SN6-1: ACERHN_15000
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Entry
ACERHN_15000 CDS
T11509
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
taty Tateyamaria sp. SN6-1
Pathway
taty03030
DNA replication
taty03430
Mismatch repair
taty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACERHN_15000 (dnaE)
03430 Mismatch repair
ACERHN_15000 (dnaE)
03440 Homologous recombination
ACERHN_15000 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taty03032
]
ACERHN_15000 (dnaE)
03400 DNA repair and recombination proteins [BR:
taty03400
]
ACERHN_15000 (dnaE)
Enzymes [BR:
taty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACERHN_15000 (dnaE)
DNA replication proteins [BR:
taty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACERHN_15000 (dnaE)
DNA repair and recombination proteins [BR:
taty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACERHN_15000 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XOL77196
LinkDB
All DBs
Position
2738510..2742010
Genome browser
AA seq
1166 aa
AA seq
DB search
MTDAARFIHLRTHSEYSLLEGALRLKKLPGMVRDAGMPALALTDTNNMFAALEFSVGMAG
AGVQPIVGCQVDLQYITPRPGERPRDPAPLVLLAQNEAGYENLMKLNSCLYLRDGSELPH
VTVDELRSHADGVICLSGGADGPVGQLLRASQRPAAEALMSALHEMFGDRLYVELQRHPG
EEGAPEAERLTERPFVEMAYAMDLPLVATNDVYFPKSDMYESHDALICIADGAYVDQQEP
RRRLTPQHYFKSQAEMVTLFADLPEAIENTVEIARRCAFMAYRRDPILPKFADDEVEELR
RQANEGLQARLKVIPHAASVEEYQKRLDFELEIIEGMGFPGYFLIVADFIKWAKDQDIPV
GPGRGSGAGSLVAYALTVTDLDPLRYALLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QEKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKLIPVEGVKPVSIEKALS
DEPRLREEARNEEVVDRLLTYGQQVEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVEQILGSGRKLHVAADGTELYIPAEGME
NDIGGIPLDDEASYKLYAAGKTVAVFQVESSGMIDALKRMKPTCIEDIVALVALYRPGPM
ENIPKYCEVKNGLSERELLHPTVDHILDETQGIIVYQEQVMQIAQEMANYSLGGADLLRR
AMGKKIQEAMDAEKPKFLAGAKDNGVDEAKAMETWALLDKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAIYFEEVRKGLGLPWVPPCVNRSDATFKVVDGA
LVYALGALKNVGVEAMRLVQDARGDKPFVNLFDFARRVDLKRVGKRPLEMLARAGAFDQL
DPNRRRVFDALDALSAYSAAIHDQKNSNQVSLFGEAGDDLPEPRLLPVDDWLPAERLGEE
HKAVGFYLSGHPLDDYAGALKRKGVLTLDAVTAKAEGGPLLTKLAGVVSGLQVRKSARGN
RFAFCQLSDTTGAYEVTLFSEALEKAQDVLVAGAKVIVGVKAELEADQLKLLGNSVTPID
TVVADVTGMGLRIYVEAPAAIASVASVLDGARQAASAAGRGPISVCLMDDSLPGEVEMEL
GVEFPVTPQIRGALKSLSGVVEVEEF
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgctgctcgattcattcacctgcgcacccattctgagtattcgctgctggaa
ggtgcgctgcgcctgaaaaagctgcccggcatggtgcgcgatgcggggatgcccgccctg
gcgctgacggacacgaacaacatgttcgccgccctggaattttcggtgggcatggccggc
gcgggtgtgcagcccatcgtcggctgccaggtcgatctgcaatacatcacgccgcgtccc
ggcgaacgtccgcgcgatcctgcgccccttgttctgctggcgcagaatgaggccgggtac
gaaaatctgatgaagctgaattcctgcctgtacctgcgggacgggtcggaattgccccat
gtgacggtggacgaattgcgcagccatgcggacggggtgatctgtctgagcggcggggcg
gatgggccggtgggccaattgctgcgcgccagccagcgcccggcggcagaggcgctcatg
agcgcgctgcacgagatgttcggtgaccggctttatgtcgagttgcagcggcatccgggc
gaggagggcgcgcccgaggcggaacggctgacggaacggccctttgtcgagatggcctat
gccatggacctgccgctggtggcgacaaatgacgtctatttcccgaaatccgacatgtac
gaatcccatgatgcgctgatctgcatcgccgacggtgcctatgtggatcagcaagagccg
cgccgccgcctcacgccgcagcattacttcaagagccaggcggagatggtgacgcttttt
gccgatctgcccgaagcgatcgagaacaccgtggaaatcgcgcggcgctgcgccttcatg
gcctatcgccgcgatccgatcctgccgaaattcgcggatgacgaggttgaggaactgcgc
cgtcaggccaatgaaggcttgcaggcgcggctcaaggtgatcccgcatgcagcctcggtc
gaggaataccagaagcggctcgatttcgagctggagatcatcgagggtatgggttttccc
ggctatttcctgatcgtggcggatttcatcaaatgggccaaggatcaggacatccccgtg
gggccgggccgggggtctggggcggggtcgcttgtggcctatgcgctgactgtcacagac
cttgatccactgcgctatgcccttctgtttgaacggtttttgaaccctgaacgggtgtcg
atgccggatttcgacatcgacttttgcatggaccggcgcgaagaagtcatccgctatgtt
caggagaaatacggccgtgacaaggtgggccagatcatcacctttggtgcgctcctgtcc
aaggcggcggtgcgcgacatcgggcgcgtgttgcagatgccatacgggcaggtggaccgg
ctgtcgaaactcatccccgttgagggcgtaaagccggtcagcattgaaaaggcactgtcg
gatgagccgcgcttgcgcgaagaagcacgcaatgaagaagtggtggaccggctgctcacc
tatggtcagcaggtcgaggggctgctgcggaatgcctctacccacgcggcgggcgtggtg
atcggcgaccggccactggatgcgctggtcccgctctatcaggatccgcggtcggatatg
cccgcgacccagttcaacatgaaatgggtggaacaggcggggttggtcaagttcgacttt
cttggcctgaagacgctgaccgtgattcagaacgcggtggagcaaatcctgggctcgggc
cgcaaactgcatgtcgcggcggatgggaccgaactctatatccctgccgaaggtatggaa
aatgacatcggtggcatcccgctggatgatgaagcgtcctacaagctttacgccgcgggc
aagacggttgcggtgttccaggtggaaagctcgggcatgatcgacgcgctcaagcggatg
aagcccacctgtatagaggacatcgtggcgcttgtggcgctttaccggcccggcccaatg
gagaacattccgaaatattgcgaggtcaagaacgggctgagcgaacgggagctgctgcat
cccacggtcgatcatatcctggatgagacgcaaggcatcatcgtctatcaggaacaggtg
atgcagatcgcccaggaaatggcgaattacagcctgggcggggcggacctgctgcgccgc
gcgatgggtaagaaaatccaggaggcgatggacgccgaaaagccgaaattcctcgccggt
gccaaggacaatggcgtcgatgaggccaaggcgatggagacctgggcgctgctcgacaag
ttcgccaattacggtttcaacaagtcccacgcggcggcctatgcggtggtcagttatcag
accgcatggctcaaggcgaaccatccggtggagttcatggccggtgtcatgaactgcgat
atccatctgacggacaagctggccatctatttcgaggaggtccgcaaggggctgggcctg
ccatgggtgcccccctgtgtgaaccgcagtgacgcgacattcaaggtggtcgacggggcg
ttggtctatgcgctgggcgcgctcaagaacgtgggtgtcgaggcgatgcggctggtgcag
gacgcgcgcggcgacaaaccattcgtcaacctctttgactttgcccggcgggtggatctg
aaacgtgtgggcaagcggcctttggaaatgctggcgcgcgcgggggcctttgaccaactg
gacccgaaccgtcgccgggtctttgatgcgcttgacgcgctgagcgcctattccgctgcg
atccatgatcagaagaattccaatcaggtctcgctctttggtgaggcgggggatgacctg
cctgaaccacggcttttgcctgtcgatgactggctgcccgcagagcgtttgggcgaagag
cacaaggcggtgggcttctacctgtcggggcatccgctcgacgactatgccggcgcgttg
aagcgcaaaggcgtgctgaccctcgatgccgtgacggccaaagccgaaggcgggccgctc
ctgacgaaactggcaggtgtcgtgtcggggttgcaggtgcgcaaatccgcacgcggcaac
cggttcgccttctgtcagttgtcggacaccaccggcgcgtacgaggtcacactcttttcc
gaggcgctggaaaaggcacaggatgtgctggttgccggggccaaggtgatcgtcggggtc
aaggccgaactggaggcggatcagctcaagctgctcggcaattcggtgacgcccatcgac
acggtggtggcggatgtcacgggcatgggactgcggatttatgttgaggcgccggcggcg
attgcatccgtcgcctccgttctcgacggcgcgcggcaagcggccagtgccgccggacgt
ggtccgatttccgtctgcctcatggacgacagcctgccgggagaggtggaaatggagctg
ggcgtggaattcccggtcacgccgcaaatccggggcgcgctgaaatccctgtccggggtg
gtcgaggtcgaggagttctga
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