Tateyamaria sp. SN6-1: ACERHN_16325
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Entry
ACERHN_16325 CDS
T11509
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
taty Tateyamaria sp. SN6-1
Pathway
taty03030
DNA replication
taty03430
Mismatch repair
taty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACERHN_16325
03430 Mismatch repair
ACERHN_16325
03440 Homologous recombination
ACERHN_16325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taty03032
]
ACERHN_16325
03400 DNA repair and recombination proteins [BR:
taty03400
]
ACERHN_16325
Enzymes [BR:
taty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACERHN_16325
DNA replication proteins [BR:
taty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACERHN_16325
DNA repair and recombination proteins [BR:
taty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACERHN_16325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
AAA_5
NPHP3_N
NACHT
AAA_25
Mg_chelatase
NTPase_1
AAA_14
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XOL77451
LinkDB
All DBs
Position
complement(3003493..3004611)
Genome browser
AA seq
372 aa
AA seq
DB search
MADDIPDPTHVPGAAHPRDTTRLVGQDTAETAFLDAFTTGRLHHAWLLTGPRGVGKATLA
WRIARFLLCTPDPDPDDMFGAPLPTSLDVAEDHPIARRIAAGAEPGLKSVHRSINDKTKR
LRDQITVDDIRALGSFFQLSATDGGRRVVIIDAADEMNVNAANALLKMLEEPPARTTLLL
VCHQPSRLLPTIRSRCRTLRLRTLTPDEMAEAMVQGGVDMAAHSAALAELSGGSVGAAMR
LALQDGLKLYAEIIALLGSMPRLDRARALAMAEAAAARGAEQKLDLFYALLDIALTRLAR
TGAMGAPPAVEAAPNEAAVLSRLAPHASQAQAWADTAQSAFDRARHGRAVNLDPAALVLD
TLFKLSATAPAQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatatccccgatccaacgcacgttccgggtgctgcgcacccgcgcgacacg
acacggctcgtgggacaggacaccgccgaaaccgcctttctcgacgcgttcacaacgggc
cgcctgcatcacgcatggctgctgaccggaccgcgcggcgtgggcaaggcgacgctcgcc
tggcgcatcgcccgctttctgctgtgcacccctgatccggaccccgacgacatgttcggc
gcacctctgcccacgtcgctcgacgtcgcggaggatcacccgattgcccggcgtatcgcc
gcgggcgcagagccggggctgaagtcggtgcaccgcagcatcaacgacaagaccaaacgc
ctgcgcgaccagatcacggtggacgacatccgcgccctgggcagcttctttcagctctcc
gccaccgatggcggtcggcgtgtcgtgatcatcgacgctgcggacgaaatgaacgtgaac
gccgccaatgcgctcctcaagatgctcgaagagccgcccgcccgcaccacgctccttttg
gtgtgtcaccaacccagccgcctcctgcccaccatccgctcgcgctgccgcaccctgcgc
ctgcgcacgctgaccccggatgaaatggccgaagccatggtgcaaggcggcgttgacatg
gccgcacactccgcagccctcgcggaactcagcggcgggtccgtcggtgccgccatgcgc
ctcgccctgcaggatgggctgaaactctatgccgaaatcattgccctgctcggctccatg
ccacgcctcgaccgcgcccgcgcgctggccatggccgaggctgccgccgcgcgcggcgct
gaacagaaactcgacctgttctatgcgctcctggacatcgcactgacccgcctcgcccgg
accggtgccatgggtgcgcccccggccgtcgaggctgccccaaacgaagcagcggtactc
tcccgcctcgccccacacgcaagccaggcccaggcctgggccgacacggcccaatccgcg
tttgaccgcgcacgccacgggcgggcggtcaatcttgaccccgccgccctcgtcctagat
acgctgttcaagctctctgccacggcccccgcgcaatga
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