Tolumonas auensis: Tola_0059
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Entry
Tola_0059 CDS
T00904
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
tau
Tolumonas auensis
Pathway
tau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tola_0059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tau03400
]
Tola_0059
Enzymes [BR:
tau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Tola_0059
DNA repair and recombination proteins [BR:
tau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tola_0059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_25
AAA_11
DNA_photolyase
DUF6439
Motif
Other DBs
NCBI-ProteinID:
ACQ91689
UniProt:
C4L7B3
LinkDB
All DBs
Position
77295..80822
Genome browser
AA seq
1175 aa
AA seq
DB search
MSIPLDILTFPLGGLRLIEASAGTGKTYTIAGLYLRLLLGHGSGDAAFGTPLPVDRILVV
TFTEAATAELRQRILKAIRDTRRALEVGHSDDQLIQNLISECPDQKLALRQLLTAERQMD
EAAIYTIHGFCQRMLTQNAFESGSLFDNEFLTEEQTLRAGAVADFWRHITYQADALLAQA
LLDHWKGPEDLLREISPHLALSGLQCQPRTAETLAERHQAIISRLNMFREAWQAAAGELE
SLISGSDVDKRSYSKKNLPNWLQKVGDWVNAPLSSYSLPKELSRFAGNELAAKSKSGTVP
SHPLFAQIETLLAQPNDIDDVVIADALTQVRARLQQQKLRQQQLSFDDLLTNLARALNSE
RGVLLAERIREQYPVAMIDEFQDTDPLQYQIFSTLYAHNPECGFYMIGDPKQAIYAFRGA
DIFTYMQAKQQVAAHYTLQTNFRSTDELVTAVNALFAHSGAPFIYQQDIPFEAVRAKGKK
AGFVLQGLPQTALQCCFPLEGTGEVSGAAYQQRMALAAAAQIHTWLVGAQQQQATLDGKP
LRPNDIAVLVRSGREAAVMQQALRECGIASVYLSNRESVFAQAVAQDVARLLEACLNPQD
EMLIRAAMATGLQGWTVSQLARLNDDETLWEQTVEHIRLAGELWRNRGILPMLRQWLFWY
QIPERLLADTNGERQLTDVLHLGELLQTAASTLNGEHALLRWLLERCHQPNGDADEQQLR
LDSERQRVQIVTIHKSKGLQYGLVLLPFICAYRGNDMPRYHTGNGVQLDLTGSEHAWEKA
AEERLAEDLRLLYVALTRGVFVTWLGLADLKINSKTKAKDDRPAALDYLLKNDSDSALTV
RFRQWLQQLNNHDRAAEVAEIAFPQTPYHEISVPLPAPQARHFSGQLERNWRVTSYSALT
VSHSTYQPTPPLPVVVSDEEPQAPRFDVFSFPRGAHAGTFLHSLLEDLDFGADDAFCRKW
ITEHLQGVQLSHDWQPEPWQPVLEQWLTQILNSELFPGLSLSQLTPQQCLSEMEFLLPLA
PLSAPALNRCLAAGDALSANAPPLAFNEVQGMLKGFIDLVFEHQGRFYVVDYKSNYLGDN
PAAYQQDAMAQAMLEHRYDVQYQLYTLALHRYLRCRLPDYDYERHIGGVCYLFLRGMNGD
AGSGVYATKPDKQHIAALDALFAGQSEIGSGEFTV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagcattccactggatattctcacctttccgctgggtggtctgcgtctgattgaggcc
agtgccggtaccggtaaaacctacaccattgcgggtctgtatctgcgcttgttgctcggc
catggctccggtgatgctgcatttggtacgccgttgccggtggatcgtattctggtggtg
acgttcaccgaagccgccactgcggagttgcgccagcgtattctgaaagccatccgcgac
acccggcgcgcactggaagtagggcacagtgacgatcagctgatacagaacttaatttcc
gaatgtccggatcagaagctggcgttacggcagttgctgaccgcagagcggcagatggat
gaagcggcgatctataccattcatggtttctgccagcgcatgctgacgcaaaatgccttt
gaatccggcagtctgtttgataatgagtttctgacggaagagcagacgctgcgtgcgggg
gcggtggccgatttctggcgccatatcacgtatcaggccgatgcgctgctggcacaggcg
ctgctcgatcactggaaaggcccggaggatttgctgcgggagatcagtccgcatctggca
ttatccggtctgcagtgtcagccgcgcacggcagaaacattggctgaacggcatcaggcg
atcattagccggttgaacatgtttcgcgaagcctggcaggcggcagccggtgaactggaa
agtttaatcagtggttccgatgtcgataaacgtagctattccaaaaagaatctgccgaac
tggctgcagaaagtcggcgactgggtcaatgcgccactgagcagttacagcctgccgaaa
gagttgtcgcgttttgcaggcaatgaactggcggcgaagagtaaaagtggcactgtgccg
tcacatccgttgtttgctcagattgaaactctgctggcacaaccgaacgacattgatgat
gtggtaattgccgatgcgttaacgcaggtgcgggcgcgtctgcagcagcagaaattacgg
cagcagcagttatcgtttgatgatctgctgaccaatctggcacgggctttaaattccgag
cgcggcgttttgctggcggagcggatccgggaacagtatccggtggccatgatcgatgaa
tttcaggataccgatccgctgcagtatcagattttttccaccctgtatgcgcacaatccc
gaatgcggtttttacatgatcggcgatccgaaacaggcaatttatgccttccgcggggcg
gatattttcacctatatgcaggcaaagcagcaggtcgcggctcattacaccctgcagacg
aatttccgttccaccgacgagctggtgacagccgtgaatgccttgtttgcgcattccggt
gcaccgtttatctatcagcaggatatcccgttcgaggcggtgagggccaaggggaaaaag
gccgggtttgtgctgcaggggctgccgcagaccgcgttgcagtgctgttttccgctggaa
ggaacgggggaggtcagtggtgctgcttatcagcaacgcatggcgctggcggcggccgca
cagatccacacctggctggtaggagcccagcaacagcaggccacgctggatggtaaacca
ctgcgaccgaacgatattgcggtgctggtgcgcagcggccgggaagcggcggtgatgcag
caggcactgcgggaatgcggcatcgccagtgtctatctgtccaaccgcgaatcggtgttt
gcgcaggcggtggcgcaggatgtggcacggctgctcgaagcctgtctcaatccgcaggat
gaaatgctgatccgggctgcgatggcgaccgggctgcagggctggaccgtgagtcagctg
gcccggcttaacgatgatgagacgttgtgggaacagacggtggaacacatccgtctggcc
ggcgagttgtggcgtaaccgggggatcttgccgatgctgcggcaatggctgttctggtat
caaatcccggaacgtttgctggcggataccaacggcgagcggcagctgaccgatgtgctg
catctgggcgaactgctgcaaactgctgccagtacattaaacggcgaacatgcattgctg
cgctggctgctggaacgttgtcatcagccgaacggtgatgcggatgaacaacagctgcgg
ctcgattctgaacggcagcgggtacaaatcgtcaccatccataaatcgaaggggttgcag
tacggtctggtgttgttgccatttatctgtgcctatcgcggtaacgatatgccgcgttat
cacaccggtaatggcgtacagctggacctcaccggttcggaacacgcctgggaaaaggcg
gcggaagagcggctggcggaggatttgcggctgctatatgttgccctgacgcgcggtgtc
tttgtcacctggctggggctggcagatctgaaaattaacagcaaaaccaaggcgaaagat
gaccggccagcagcactggattatttgctaaagaacgacagtgattctgcgctgaccgtc
cgtttccggcagtggctgcagcagttgaacaatcatgatcgggcggctgaggtggcggaa
attgctttcccgcagacgccgtatcacgaaatcagtgtgccattgcccgccccgcaggca
cggcattttagcgggcaactggagcgcaactggcgggtgacctcttattccgcactgacg
gttagtcatagtacctatcagccaacaccacccttgccggtggtggtcagtgatgaagaa
ccacaggcgccccgctttgatgtgttcagttttccgcgtggtgcgcacgccggtactttc
ctgcacagtctgctggaagatctcgattttggtgctgacgatgcgttctgccgaaaatgg
atcaccgaacatctgcagggggtgcagctcagtcatgactggcagccggaaccgtggcaa
ccggtactggaacaatggctgacgcagatcctgaacagtgagctgttccccggattatcc
ctgtcgcaactgactccgcagcaatgcctgagcgagatggaatttctgctgccgttagcg
ccattgtcagcccccgccctgaaccgctgtctggccgcgggggatgcgctttccgccaac
gcaccaccgctggccttcaatgaagttcagggcatgctgaaaggctttatcgatctggtg
tttgaacatcagggacgtttctacgtggtggactataagtcgaattatcttggtgataat
ccggcagcctatcagcaggacgcaatggcgcaggcgatgctggaacaccgctatgatgtg
cagtatcagctgtatacgctggccctgcaccgctatctgcgttgccggttgccggactac
gactatgagcggcatatcggcggtgtctgctatctgttcctgcgcggcatgaacggtgat
gccggtagcggggtatatgccaccaaaccggataaacaacatattgcggcgctggatgcc
ttgtttgccggtcagtctgaaatcggatccggggagtttacggtatga
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