Tolumonas auensis: Tola_0060
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Entry
Tola_0060 CDS
T00904
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tau
Tolumonas auensis
Pathway
tau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tola_0060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tau03400
]
Tola_0060
Enzymes [BR:
tau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Tola_0060
DNA repair and recombination proteins [BR:
tau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tola_0060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
DEAD
CbiA
nSTAND3
SRP54
TrwB_AAD_bind
ATPase
AAA_29
Mg_chelatase
AAA_7
AAA_24
AAA_25
AAA
T2SSE
bpMoxR
AAA_5
AAA_28
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ACQ91690
UniProt:
C4L7B4
LinkDB
All DBs
Position
80819..82717
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AA seq
632 aa
AA seq
DB search
MTFTFPALTPCWQALLEARLLRDLDVQLAQLLARWDADESVQLAVALTSQELGRGHVCFD
LSTWPERLAQWQAQLSQAALSWPETTVAALDAKLQQSPLVRVITDPSDAEEQGQPLTLFA
GRLYLSRYFRFEQQVACWLQQASLPADNAVNATELAAQLRQLFTPQPETDWQAVAVATAC
EGRFTLISGGPGTGKTTTVTKLLALLVAQSEQSLLIRLAAPTGKAAARLTESIAKAKTEL
ATQVNADWLEGIPTQASTLHRLLGVIPGQPEFRHHAQNPLPLDVLVVDEASMIDLPMMAR
LLAALPPQARLILLGDKDQLASVEAGAVLGDICRFVAQGISQPQAECLQQRTGYDLQPYV
QVTGHPLCDRLCLLRKSWRFAADSGIGKLAEAVNNGDEKTAQAVWTRDYRDIRLHSDEQR
LEMAVKLAAEGYHAYLALLDKPMSAEGAVALLQAFNQIRLLCALHDGPWGINGMNQAIGQ
RLQTQGRLQMTADWFAGRPVMITENDYGLGLYNGDIGIAASDGERLRVWFVLPDGKAHGF
LPSRLPAHDTAWAMTVHKSQGSEFTHTLLLLPPETNPLLTRELLYTGITRAREQLDLFAT
PEVLALMVRKQTERYSGLVTMLETMRALHDAE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacattcacttttcctgcgttaaccccttgctggcaggcattactggaagcccgtctg
ctgcgtgatctggatgtccagctagcgcaactgctggctcgctgggatgctgacgaaagc
gtgcagctggcggtggcactgaccagtcaggaactcgggcgcgggcatgtctgctttgat
ctcagtacctggccggagcggctggcgcagtggcaggcccagctatcgcaggcagcatta
agctggcctgagaccaccgtggcagcgctggatgcaaagctacagcagagcccgctggta
cgggtcatcactgatccttcggatgctgaggaacagggccagccgttgacgctgtttgcc
ggccggctctacctcagccgttactttcgttttgaacagcaggtggcgtgctggctgcag
caagccagtctgccagcggacaacgccgtgaatgcaaccgaactggccgcgcagttacgg
cagttgtttacaccgcagccggaaaccgactggcaggcggtggccgtcgccacggcttgt
gaggggcgctttaccctgatctccggcggccccggcactgggaaaaccacgacagtgacc
aaactgctggcgttgctggtggcgcagagtgagcaatcattgctgatccggctggcggca
ccgaccggaaaggcggctgcccggctgacggaatcgatcgccaaagccaaaaccgaactg
gcaacacaggtgaatgccgactggctggaaggtattccgacgcaggccagtaccctgcat
cgtctgctgggggtgatccccggtcagccggagttccgccaccatgcgcagaatccgttg
ccactggatgtgctggtggtcgatgaagcctcgatgatcgatctgccgatgatggcacgt
ctgctggccgcgttaccgccgcaggcgcggctgatcctgctgggagataaagaccagctg
gcgtcggtcgaagcgggtgcggtgctgggcgatatctgccggtttgtggcgcagggcatc
agtcagccacaggcggaatgcctgcagcaacgcaccggctatgatttgcagccgtatgtg
caggtcaccgggcatccgctgtgcgatcggctttgtctgctacggaaaagctggcgtttt
gctgcggactccggcatcggtaaactggccgaagcggtgaataatggcgatgaaaaaacg
gcacaagcggtatggacgcgggattaccgcgatatccgtctgcacagcgatgaacagcgg
ctggaaatggcagtgaagctggccgctgagggatatcatgcctatctggcattgctggat
aaaccgatgagcgccgaaggcgcggtcgcgctgttacaggctttcaaccagatccgcctg
ctgtgcgccctgcatgacgggccgtggggcatcaatggcatgaatcaggcgattggtcag
cgcctgcagactcagggcagactgcagatgacggcggactggtttgccggtcgcccggtg
atgatcaccgagaatgattatggtctggggctgtataatggcgatatcggcattgctgcc
agcgacggtgaacggttgcgggtctggtttgtgctgccggatggaaaggcgcatggtttt
ctgcccagtcgcctgccggcgcacgataccgcctgggcgatgaccgtacataaatcgcag
ggttcggaatttacccacacgctgctgctgttaccgccggagacgaacccgttgctgacc
cgcgagttgctctataccggcatcacccgggcacgtgaacagctggatctgtttgccacg
ccggaagtgctggcattgatggtgcgcaaacagaccgaacgctacagcggcttagtgacc
atgctggaaacaatgcgtgcgttgcatgacgcagaataa
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