Tolumonas auensis: Tola_0064
Help
Entry
Tola_0064 CDS
T00904
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tau
Tolumonas auensis
Pathway
tau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tola_0064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tau03019
]
Tola_0064
Enzymes [BR:
tau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Tola_0064
Messenger RNA biogenesis [BR:
tau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Tola_0064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_25
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACQ91694
UniProt:
C4L7B8
LinkDB
All DBs
Position
complement(85677..87146)
Genome browser
AA seq
489 aa
AA seq
DB search
MSFTELGLSEPLLRAVKDKGYDTPSPIQLQAIPAVLAGQDVMAAAQTGTGKTAGFTLPLL
HRLSRGNPARSNAVRALVLTPTRELAAQVAESVTTYGKYLPLKSVVVFGGVNINPQMLAM
RKGADVLVATPGRLLDLVSQNALHFRQLEVLILDEADRMLDMGFIRDIRKIINMLPKDRQ
TLMFSATFSDEIRTLAKGLLNEPVQIDVAPRNTTAETIKQTICPVDKGRKPALLCHLIKH
NNWQQVLVFMRTKHGANKLVTQLETAGIQAAAIHGNKSQGARTRALSGFKDGSVRVLVAT
DIAARGIDIAQLPQVVNYELPNIAEDYVHRIGRTGRAGMEGHAISLVSADEQPLLVDVEK
LIKQILPREEFDGFKPQNPVAMTTEAQLTRPVKKPKKPKMFDDGRSQEPRQQRSPRSSQG
EQHKAHSPHTGQPRPHQPKQAEGAAKPASPTRSGTQRAGQPSRSANAPAGRPQGNRSAAG
GQRSSKPQH
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttactgaacttggcttaagcgaaccactactgcgcgccgttaaagataaaggc
tacgacaccccatcaccgatccagttacaggctattccggccgtattggcgggtcaggac
gtgatggccgcagcacaaaccggtaccggtaaaaccgcaggttttacgctgccgttgctg
caccgtctgtcgcgcggtaatccggcccgctctaatgccgttcgcgcactggtgctgacc
ccgacccgcgaactggcggctcaggttgctgaaagcgtcaccacctacgggaaatacctg
ccactgaaatccgtggtggtgttcggtggcgtgaatattaatccgcaaatgctggcgatg
cgcaaaggcgctgacgtgctggttgcgaccccaggccgtctgctggatctggtcagccag
aacgccctgcatttccgccaactggaagtgctgatcctggatgaagccgaccgcatgctg
gacatgggctttatccgcgatatccgcaaaatcatcaacatgctgccaaaagatcgtcag
acactgatgttctccgcgaccttctcggatgagatccgcacgctggccaagggcctgctg
aacgagccggtacagattgatgtggcaccacgtaacaccactgccgaaaccatcaaacag
accatctgcccggtggataaaggccgtaaaccggctttgttgtgccatttaatcaaacac
aacaactggcagcaggtactggtatttatgcgcaccaaacacggcgcgaataaactggtg
acacagctggaaaccgccggtattcaggccgccgcgatccacggtaacaagagtcagggc
gcgcgtacccgtgcgttatccggcttcaaagatggctccgtgcgtgtactggttgcgacc
gatatcgccgcgcgtggtatcgacatcgcccagctgccacaggtagtgaactatgaactg
ccaaacatcgcggaagattacgtgcaccgtattggtcgtactggccgtgccggtatggaa
ggtcatgctatttcactggtgagtgccgatgaacagccgctgctggttgatgtggaaaaa
ctgatcaaacagatcctgccacgtgaagaattcgacggttttaaaccacagaatccggtc
gcaatgaccacggaagcgcaactgacccgtccggtgaaaaagccgaaaaaacctaagatg
tttgatgatggccgcagccaggaaccgcgtcagcaacgctcaccacgctcatcacagggc
gagcagcataaagcgcactcgccgcataccggtcagcctcgcccgcatcagccaaaacag
gcggaaggtgccgcgaaacccgcatcgcctacccgttctggtactcagcgtgccggtcag
ccgtcacgttcagctaatgcaccagccggtcgtccgcaaggcaaccgctctgccgctggc
ggacaacgcagcagcaaaccgcagcactaa
DBGET
integrated database retrieval system
