Tolumonas auensis: Tola_0131
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Entry
Tola_0131 CDS
T00904
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tau
Tolumonas auensis
Pathway
tau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tola_0131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tau03400
]
Tola_0131
Enzymes [BR:
tau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Tola_0131
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Tola_0131
DNA repair and recombination proteins [BR:
tau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tola_0131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ACQ91761
UniProt:
C4L7W2
LinkDB
All DBs
Position
141994..142824
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVEVSRLGITPWMEGIVVERVVIRHPRLRWPIPSEIRLLEGQPLRQIERRAKYLL
LRSTLGTAILHLGMSGRLRILPIGTPAEKHDHVDLELANGKLLRFHDPRRFGALLWTAED
PYQHPLLKTLGPEPLTDAFTADYLWQRSRKPRSAIKPWLMDNRVVVGVGNIYANEALFMA
HIHPKRAVNSLTPEESQALVAAVKKVLARAITQGGTTLRDFMRTDGKPGYFVQELLVYGR
AGQPCTVCAHPLEELRLGQRSSVYCPICQPFAGGYD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagttgaagtcagccgattaggtattactccctggatggaggga
atagtagtagagcgagtggttatccgtcatccccgtttgcgctggcccattccgtcggag
atccgtttgcttgaggggcagcctttgcgacagattgaacgcagagctaaatatttgcta
ctgcgttcaacactgggaacggcgattttacatctgggcatgtcgggtcgtttgcgaata
ttgccaatcggaacgccggcagaaaaacatgatcatgtggatttggaattagcgaatggt
aaattgctgcgctttcatgatccgcgacgatttggtgctttattgtggacagctgaggat
ccttatcaacacccgttgttaaagactctggggccggagccattaacggatgcgtttact
gccgattatttatggcaacgcagccggaaaccccgcagcgcgattaaaccgtggctgatg
gataaccgtgttgttgtgggtgttgggaatatttatgccaatgaagcgctctttatggca
catattcacccgaaacgcgcagtgaactcgctgacaccagaagagagtcaggctttagtt
gctgccgtgaaaaaagtgcttgcccgcgcgatcacgcaaggcggcactacgttacgggat
ttcatgcgaactgatggtaaacccggttattttgttcaggagttactggtatacggtcgg
gcagggcaaccttgcacggtatgtgcgcatccattggaagaactgcgccttggtcagcgc
agtagtgtgtattgcccgatttgtcagccgtttgccggaggttatgactga
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