Tolumonas auensis: Tola_0349
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Entry
Tola_0349 CDS
T00904
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tau
Tolumonas auensis
Pathway
tau03420
Nucleotide excision repair
tau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tola_0349
03430 Mismatch repair
Tola_0349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tau03400
]
Tola_0349
Enzymes [BR:
tau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tola_0349
DNA repair and recombination proteins [BR:
tau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tola_0349
MMR (mismatch excision repair)
Other MMR factors
Tola_0349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
ACQ91979
UniProt:
C4L980
LinkDB
All DBs
Position
complement(392583..394772)
Genome browser
AA seq
729 aa
AA seq
DB search
MDISHLLDGLNDKQRDVVAAPLQNMLVLAGAGSGKTRVLVHRIAWLLQIEQVSPHSILAV
TFTNKAAAEMRGRIERLLGNSLGFGRGGMWIGTFHGLAHRLLRAHPLDANLPEDFQIIDS
DDQLRLLKRILRNLNLDEKQWVPRAVAGYINSKKDEGLRPHHIDVYDPVGRTYQKIYATY
QETCDRAGLVDFAELLLRAHELWLHKPHLLEHYQQRFRHILVDEFQDTNGIQYAWIRMLA
GDSSKVMIVGDDDQSIYGWRGARVENIQRFMQDFDDVQTIRLEQNYRSTSTILKAANQLI
ANNSARLGKELWTDGVAGESISVYAAFNEIDEARFVVSRLKAWREQGNSLLDAAILYRNN
AQSRILEEALMQEQLPYRIYGGLRFFERQEIKDAIAYLRLLSNHSDDASFERVVNTPTRG
IGDRTLGLIREAARDRSLNLWQSAWQLCEQGVLAGRAANAVRNFLALINQLETDTSELPL
HVQVDRVIRQSGLWTHYENEKGEKGQSRIENLEELVNATRLFRPAEEYLDMSPLTAFLAH
ATLESGDKQADEFDEAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQQSSEEPGRLEEERR
LCYVGMTRAMQKLYLTHAESRRLYGKESYNRPSRFLKELPSDCLEEIRLRTQVGWSNSAQ
SQSRFSQEKLQDSFASTGFKLGQRVLHPTFGEGVVLNYEGVGAQSRVQVNFATAGSKWLV
VAYARLEAI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggatatctcccacctgctggatggtctgaacgataaacaacgcgacgtcgttgcagct
ccgctgcaaaacatgctggtactggctggtgccggtagtggcaagacccgggtgctggtt
catcgcattgcctggttgttacagatcgagcaggtatccccgcacagcattctggccgta
accttcaccaacaaagcggccgcagagatgcgcggacgtattgaacgtctgctcggaaac
agtctcggttttggccgcggcggcatgtggatcggcacctttcatggtttggctcatcgt
ctgctgcgggctcatccgctggatgccaatctgccggaagattttcagatcatcgacagc
gatgatcagttgcggctgctgaaacgcattctgcggaacctgaatctggacgaaaagcag
tgggtaccccgcgccgttgccggttatatcaacagcaaaaaagacgaaggcttacgtccg
caccatattgatgtttatgatccggtgggccgcacctaccagaaaatttatgccacctat
caggaaacctgtgatcgtgccggtttagtcgattttgccgaactgctgctgcgggcccat
gagttatggctgcataaaccccatctgctggaacactatcagcaacgcttccgccatatt
ctggtggatgaatttcaggatactaacggcattcaatacgcctggatccgcatgctcgcc
ggtgacagcagcaaggtgatgatcgtcggggatgatgaccagtccatctacggctggcgt
ggtgcccgcgtggagaacatccagcgtttcatgcaggattttgacgacgtacaaaccatc
cgtctggaacagaattaccgttccaccagcaccatattgaaagcggctaaccagcttatt
gccaacaactcagcccggctgggtaaagaactctggacggatggtgtcgctggcgaatca
atttccgtctatgccgccttcaatgaaattgatgaagcccgctttgtagtcagtcgcctg
aaagcctggcgcgaacagggtaacagcttgctggacgccgccattttataccggaacaac
gcccagtcgcgcattctggaagaggcgctgatgcaggaacagttaccgtatcgtatctac
ggtggtctgcgcttcttcgaacgtcaggagatcaaagatgccatcgcttacctgcgtctg
ctcagcaatcacagtgacgatgcctcctttgaacgcgtcgttaacaccccaacccgcggc
atcggcgatcggacgctgggccttatccgggaagcagctcgtgaccggagcctgaacctg
tggcaatccgcctggcagttgtgtgagcagggtgtgctggctggccgggctgccaatgcg
gtgcgtaactttctcgcgctaatcaatcagctggaaaccgatacgtcagaattaccgctg
catgtgcaggtcgatcgggtgatccgccagtccggtttatggacgcattacgaaaacgag
aaaggtgaaaagggtcagtcacgtatcgaaaacctggaagaactggtcaacgccacccgg
ttatttcgtccggccgaagaatatctggatatgagcccgctgaccgcctttctggcacat
gccacgctggagtccggcgataaacaggcggatgaatttgacgaagcggtacagctgatg
acactgcacagcgccaaagggctcgaattcccgctggtctttatggtgggtgttgaagaa
ggcatgttccccagccagcagagttcggaagaaccgggacgcctcgaagaagaacgccgt
ctctgctatgtcggcatgacccgagcgatgcagaagctctatctgacgcatgcggaaagc
cgccgtctgtacgggaaagagagttacaaccgccccagccgctttctgaaagagttgccc
agtgactgtctggaagaaatccggctgcggacacaggtcggctggagtaacagcgctcag
tcgcaaagccgttttagtcaggaaaagctgcaggacagtttcgccagtaccggttttaaa
ctgggtcaacgggtgctgcatccgacctttggtgaaggtgtggtgcttaactatgaaggc
gtcggtgcacaaagccgggtgcaggtaaactttgccacagctggcagcaaatggctggtc
gttgcctatgcccgtctggaagctatttaa
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