Tolumonas auensis: Tola_1117
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Entry
Tola_1117 CDS
T00904
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
tau
Tolumonas auensis
Pathway
tau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Tola_1117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tau03400
]
Tola_1117
Enzymes [BR:
tau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Tola_1117
DNA repair and recombination proteins [BR:
tau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Tola_1117
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tola_1117
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tola_1117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
MIOS_WD40
Motif
Other DBs
NCBI-ProteinID:
ACQ92743
UniProt:
C4LDE7
LinkDB
All DBs
Position
complement(1219796..1221316)
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AA seq
506 aa
AA seq
DB search
MSLRPVSITVDWVFLLPDFIQNSLIKRFLATSGVILTAKTENTFLFHDYETFGIDPARDR
PAQFAGIRTDADFNICGEPVVIYCQMSPDYLPAPEACLITGITPQIANQNGICEADFFRT
IHQQFSQPATCVLGYNNIRFDDEFTRYGFYRNFLDPYAYSWQQGNSRWDLLDVARAFYAL
RPEGINWVYDAEGKPSFRLEKLSVANGIQHENAHDAMSDVYATIGLAKSLKQAQPRLFEY
LSTHRGKNKLKNLIDIINIKPLVHVSGMFSAVQGCVSWIAPMAWHPTNNNAVIVIDLHKD
LSPLLELNITELRERLYTRKDDITDGSPVPVKLIHINKCPVLAPASSLSEERAQELGINR
DLCMQNLAVLRQNPQIREKLAGLFSDEYIPPANQDPEHMLYQGFFSEADRAAIDLIQQAS
AEQLAAGQYQFHDPRLPTLLFRYRARNYPHTLSPREQQQWQQFCVDALNSRAEPYLLRLE
ALLEGKVPGTREWNIIKALALYLQGK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcttcgcccagtcagcatcacagttgactgggtttttttattgcctgatttcatc
cagaatagccttatcaaacgctttttagccacaagtggtgttattttgacagctaaaact
gaaaatacgtttctctttcacgattatgagacatttggcatagatccggcccgtgatcgt
ccggctcaatttgcaggtattcgcacagatgctgactttaatatctgtggtgaaccggtg
gtgatttactgccaaatgtcgcctgactatctaccggcgcccgaagcctgcctgatcacc
ggcattaccccgcagatcgcgaatcagaacggtatctgtgaagcagattttttccgtacg
atccatcagcagttttctcagccggccacgtgtgtgctgggttataacaatatccggttt
gatgatgagttcacccgttacggtttttaccggaactttcttgatccctatgcttacagc
tggcagcagggtaactcccgctgggatctgctggatgtcgcccgggctttttatgccctg
cgaccagaaggtattaactgggtatatgacgctgagggtaaaccctctttccgtctggaa
aaactctctgttgccaatggcattcagcatgaaaatgcgcacgatgccatgtctgatgtt
tatgccaccatcggcctggcgaagtcactgaagcaagctcaaccccgtctgtttgaatat
ttatcaacccatcgcgggaaaaacaaactaaagaatctgatcgatattattaacatcaaa
ccactggtacatgtttctggcatgttttctgctgtgcaaggctgcgtaagctggatcgct
ccgatggcatggcatccgacaaataacaatgccgtgattgtgatcgatcttcataaagac
ctgtcaccattactggaactgaatatcactgaattgcgggaacgtctttacaccagaaaa
gacgatataaccgacggatcaccggttccggtcaaactaatccatatcaataagtgtccg
gtacttgcaccagcctccagtctgagtgaagagcgggctcaggaattaggcattaatcgt
gatctctgcatgcagaatctcgcggtattacgacagaatccacagataagagagaagttg
gcagggctcttcagcgatgaatatatcccgccggcaaatcaggatcctgagcatatgctt
tatcagggatttttctcggaagccgaccgggccgcgatagatctgatacagcaggcatcc
gcagaacagttagccgccggtcagtatcaatttcatgatccgcgcctgccgaccctgctc
ttccgttaccgggcaaggaactatccgcatactctttcaccgagagagcagcagcaatgg
cagcaattctgtgttgatgcgcttaactctcgggctgagccttacttgctgcgtctggaa
gcgctgttggaagggaaagttccgggtacccgtgaatggaatatcattaaagcgctggct
ttatacctgcaaggtaaatga
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