Tolumonas auensis: Tola_2658
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Entry
Tola_2658 CDS
T00904
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
tau
Tolumonas auensis
Pathway
tau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tola_2658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tau03019
]
Tola_2658
Enzymes [BR:
tau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Tola_2658
Messenger RNA biogenesis [BR:
tau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Tola_2658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_11
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACQ94252
UniProt:
C4LB49
LinkDB
All DBs
Position
complement(2910228..2911505)
Genome browser
AA seq
425 aa
AA seq
DB search
MSKTHLTEITFAELGLEPQVLAGVEAKGFHNCTPIQAETIPLLLTGKNIAGQAQTGTGKT
IAFLAGTFNYLLTHSASAERRQNQPRVLIMAPTRELAVQIYNDAVPMSESCGFKMGLAYG
GDGYDKQLAVLQEGVDLLIGTTGRIIDYLKQGIIDLGAIQVVVLDEADRMFDLGFIKDIR
FLFRRMPPPAQRLNMLFSATLSLRVQELAYEHMNEPQHIQIEPEQMTGQRIKEELFYPSN
EDKMLLLLTLMEEDWPEKAIIFANTKHGCEDVHAWLQADGHRVGLLTGDVPQKKRLKILE
DFTAGLLDVLVATDVAARGLHIPDVSHVFNYDLPDDAEDYVHRIGRTGRAGRSGHAISFA
CEDYAFNLPEIEEYTHHPIPVSKYDPSALLDDVTAPKRVVRHRLPVNRNMRDRQSTGRRR
PGNKS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatcttacagagatcacattcgctgaactcggactggaaccacaagtt
ctggccggcgtggaagctaaaggctttcataattgcacgcctattcaggcggaaactata
cctctgctgctgaccgggaaaaacattgcgggccaggcacagaccggtaccggcaaaacg
atcgcgtttcttgccggtacattcaactatttactgactcattcagcaagtgctgaacgt
cgtcagaatcagccgcgtgtgctgatcatggcgccaacccgtgaactggccgtacagatt
tataacgatgcggttccgatgtctgaaagctgtggctttaagatggggctggcttacggt
ggtgatggctacgataagcagctggccgtattgcaggaaggtgttgatctgctgatcgga
accactggccgtattatcgattatctgaaacagggcattattgacctgggtgccattcag
gttgttgtgctggatgaagcggatcgtatgttcgatctgggctttatcaaggacatccgt
tttctgttccgtcggatgccgccgccagcgcaacgtctgaacatgctgttctctgccacc
ttgtcactgcgtgtgcaggagttggcttatgaacacatgaatgagccgcagcatatccag
atcgaaccggaacaaatgaccggtcagcgcatcaaggaagagctgttctatccttctaac
gaagacaagatgctgctgttactgacgctgatggaagaagactggccggaaaaagcgatc
atcttcgccaataccaaacacggttgtgaagatgtgcatgcctggttgcaggcggatggc
catcgtgtcggtctgctgaccggtgatgtgccacagaagaaacgtctgaagatcctggaa
gattttactgccggtctgctggatgtgctggtggcgactgatgtggcggctcgtggtctg
cacattccggatgtaagtcatgtgtttaactatgatttaccggatgacgcggaagattat
gtgcatcgtatcggccgtactggtcgtgctggccgtagcggacatgcaatcagcttcgct
tgcgaagattacgcgttcaacctgcctgaaatcgaagaatatacgcatcatccgattccg
gtcagcaagtatgatccaagtgcattgctggatgatgtgacagcgccaaaacgcgtggtc
cgtcatcgtctgccggtaaaccgtaatatgcgtgatcgccaatcgacaggccgtcgccgt
ccgggtaataaatcttaa
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