Tolumonas auensis: Tola_2978
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Entry
Tola_2978 CDS
T00904
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tau
Tolumonas auensis
Pathway
tau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tola_2978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tau03019
]
Tola_2978
03400 DNA repair and recombination proteins [BR:
tau03400
]
Tola_2978
Enzymes [BR:
tau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tola_2978
Messenger RNA biogenesis [BR:
tau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Tola_2978
DNA repair and recombination proteins [BR:
tau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tola_2978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
zf-CXXC
HEM4
Motif
Other DBs
NCBI-ProteinID:
ACQ94567
UniProt:
C4LD36
LinkDB
All DBs
Position
complement(3263627..3265441)
Genome browser
AA seq
604 aa
AA seq
DB search
MQSHPYPQPLDVLREVFGYQAFRPGQDAVIAQLVSGHDVLAIMPTGGGKSLCYQIPALVR
PGLAIVVSPLIALIKDQVDALRANGVAAAGLHSGLARDELLEVYSQLWRGDLKLLYVAPE
RILLPDFLARLQDIPLALIAIDEAHCISQWGHDFRPEYAELGRLKQLFPQVPIAALTATA
DDATRLDILNRLGLHEPLVHLASFDRPNIRYTLVEKFKPSEQLLHYVQKQAGQCGIVYCT
SRKRTEEVADILKVRNYRAACYHAGLPADERARVQDAFIRDDLDIVVATVAFGMGIDKPN
VRFVVHYDIPKNIESYYQETGRAGRDGLPAEALLLFDPADIERVRGLLEKNENAEQRQVE
IFKLNLMSAFAEAQTCRRQVLLNYFGEYHAEPCGNCDICLDPPKTYDGTEDAQKALSCVY
RVGQRYGMGHVIEILRGAQSQRIRELGHDKLSTYGIGKEQSHEYWVSVLRQLIHKGLLVQ
NITRHLVLQLTEAARPILRGEQALELAVPRTELLSAKKLRRRELELAQGEDAALFRELRK
LRKQLAEEEGIPPYVVFNDATLLELAQFRPTTESEMLTINGVGYRKLERFGEVFLECIRE
HAEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtcacatccgtatcctcagccgttagacgtgctgcgggaggttttcggctatcag
gcatttcgtccgggacaagatgcggtaattgcgcaattagtttccggacacgatgtgctg
gcgatcatgcccaccggtggcggaaaatcgttgtgctatcaaattccggccctggtgcgc
cccggtctggcgattgtggtttcgccactgattgcgttgatcaaagatcaggtcgatgcg
ctgcgggcaaatggtgtcgccgcggctggtttacattccgggctggcacgtgacgagttg
ctggaagtttacagtcagctctggcgtggcgatctgaaactgctgtatgtggcgccggag
cgtatcttgctgccggattttctggcgcgattgcaggatatcccgctggcgctgattgcc
attgatgaagcgcactgtatctcgcagtgggggcatgatttccgcccggaatatgctgaa
ttgggaagactgaaacaactcttcccgcaggtacccatcgccgcgctgacggcgacggcg
gatgatgcgacccgcctggatattctcaaccgcttaggtttgcatgaaccattggtacat
ctggccagtttcgaccggcctaatatccgttacacactggtcgaaaagtttaaaccctcc
gagcagttactgcattacgtacaaaaacaggccgggcagtgcggtatcgtctattgcacc
agccgtaaacgtaccgaggaagtggctgatatactgaaggtccgcaattaccgcgccgcc
tgttatcacgccggattaccggcagatgaacgggcccgggtgcaggatgcgtttatccgc
gatgatctggatattgtggtcgccaccgtggcctttgggatggggatcgacaaacccaac
gtgcggtttgtggtgcattacgatatcccgaaaaatatcgaatcctactatcaggaaacc
ggtcgggccggtcgtgatggtctgccggcagaagcattattactgtttgatccggcagat
attgaacgtgtcagaggattgctggaaaaaaacgagaatgccgaacagcggcaggtcgaa
atcttcaagctgaatctgatgtctgcgtttgccgaggcacaaacctgccggcgtcaggta
ttgctgaactactttggcgaataccatgccgaaccttgtggcaactgcgatatctgtctt
gatccaccgaaaacttatgacggcaccgaagatgcgcagaaagcactgtcctgtgtttac
cgggtcggacagcggtacggcatggggcatgtgatcgaaatactgcgtggtgcacagagt
cagcggatccgcgaactgggacacgacaaactctctacgtatgggatcgggaaagaacaa
tcccatgaatactgggtatccgtgctgcgtcagctgatccataaagggttgctggtacag
aacatcacccggcatctggtgctgcaactcacggaagcggcgcgccccatcttgcgtggt
gaacaggctttagagcttgcggttccccgtaccgagttgttatcggcgaagaagctacgc
cgccgcgaactggaactggcacaaggggaagatgcggcgctgttccgtgaattacgcaaa
ctgcggaaacagctggccgaggaagagggcattccaccgtatgtggtatttaacgatgcg
actttgctggagttggctcaattcagaccgaccactgaatccgagatgctgaccatcaat
ggcgtgggttaccgtaagttagaacgcttcggtgaggtatttctggaatgcatccgtgaa
catgctgaactgtag
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integrated database retrieval system
