Tolumonas auensis: Tola_3016
Help
Entry
Tola_3016 CDS
T00904
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tau
Tolumonas auensis
Brite
KEGG Orthology (KO) [BR:
tau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tau03016
]
Tola_3016
Enzymes [BR:
tau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Tola_3016
Transfer RNA biogenesis [BR:
tau03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Tola_3016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
Rho_RNA_bind
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ACQ94605
UniProt:
C4LD74
LinkDB
All DBs
Position
complement(3303319..3305379)
Genome browser
AA seq
686 aa
AA seq
DB search
MFQDNPLLAQLKQQLRDNLPKKEGVVRASDRGFGFLETDHRGESYFIAPQQMKRVMHGDR
IIAVIRAENGKEQAEPESLVTPFLTRFVARIKVIKDRLFVVPDHPVMKDAIKARPMKGLD
EKQFKEGDWVIANLKRHGMSDASGHFAEITEYVTHNNDPEAPWWVVLRRHDLPRCAPDIE
QEWQLREEGLTREDLTALPFVTIDGESTRDMDDALYVEKTADGWKMLVAIADPTAYIEPG
SALDLEAAKRAFTVYLPGRNIPMIPRHLSDELCSLHEGEERPALCCEMLITAAGELLPEP
RFFAANIRSQGRLIYDQLSDWLENGSAEGFDPAPVIVEQIELLHAATTARQTWRKEHAIL
FKDRPDYDFELNEAGEVVAIHASFRRSANKIVEESMIAANQCAGDFLAAQPGYGIFNVHA
GLDVEKFKGVQELLQLHEAPLTDETLLTLPGFCQLRHWLDAQPTSYLDNRIRRFQTYSLM
SAEPGPHFGLGLSHYATWTSPIRKYGDMINHRILKAIISQQEVPVRADAALTDALSLSRR
SNRMAERDIGDWLYARFLLPAVASQQVFDAEIMDVMRSGLKVRLLENGAVCFIPGSLILK
DRKRFVCNHDEGRAYLDGEIHYELGQTIQVKLQDAIEATRTLVAIPTELPSAAAPVTKEV
LAESEHELMDELLTEPEETAPEEDEA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgttactggcgcagctcaagcagcagcttcgcgacaatctgccg
aaaaaagaaggggtcgttcgcgcctctgaccgtggcttcggctttctggaaaccgatcac
cggggtgaaagctacttcattgcaccacagcagatgaagcgagtaatgcacggtgaccgg
attatcgccgtcatccgcgctgaaaatggtaaagaacaggctgagccggaatcactggtc
accccgttcctgacccgcttcgtggcccgcattaaagtgatcaaagatcgcctgttcgtg
gtgccggaccatccggtcatgaaagacgcgatcaaagcacgcccgatgaaaggactggat
gaaaagcagttcaaagaaggcgattgggtcattgccaatctgaaacgtcacggcatgagt
gatgccagtggccatttcgctgaaattaccgaatatgtgacgcataacaacgatccggaa
gcgccgtggtgggtggtgttacgtcgccatgatctgccgcgttgtgccccggacattgag
caggaatggcaactgcgtgaggaaggtctgacccgtgaagatctgactgcgctgccgttt
gtcactatcgacggtgaatcgacccgcgatatggacgatgccttatatgtagaaaaaacc
gctgacggctggaaaatgctggtggcgattgccgatccgaccgcgtatatcgagccgggt
agtgcgctggatctggaagccgcaaaacgcgcgtttaccgtctatctgccgggccgcaac
attccgatgatcccgcgtcacttgagtgacgagctgtgttcactgcatgaaggtgaagag
cgtccggcactgtgctgtgaaatgctgatcacggcagccggtgagctgttaccggagccg
cgtttctttgccgcgaatatccgctcacaaggtcgtctgatttatgatcagctgtccgac
tggctggaaaacggcagtgcagaagggttcgatccggcaccagtcatcgtcgaacagatc
gaactgttgcacgcggcaaccaccgcgcgtcagacctggcgcaaagagcacgccattctg
tttaaagaccgtccggactacgatttcgaactgaacgaagccggtgaagtggtggcgatc
cacgcctcattccgccgcagtgcgaacaagatcgtggaagaatcgatgattgccgccaac
cagtgcgccggtgatttccttgccgctcagccgggttatggcattttcaacgtgcatgcc
ggtctggatgttgagaaattcaaaggcgtgcaggaattactgcagctgcacgaagcgccg
ctgactgacgaaacgctgctgacgctgccgggcttctgccagttgcgtcactggctggat
gcgcaaccaaccagctatctggacaaccgtatccgtcgtttccagacctactcgctgatg
tcggcggaaccgggcccgcatttcggcttaggtttgagccattacgcgacctggacgtcc
ccgatccgtaaatacggcgacatgatcaaccaccgcatcctgaaggcgattatcagccag
caggaagtgccagtgcgtgccgatgccgcgctgaccgatgcgttgagtctgtcacgtcgt
agcaaccgcatggcggagcgcgatatcggcgactggttatatgcccgcttcctgttaccg
gccgtggcttcacagcaggtatttgatgcggaaatcatggatgtgatgcgcagtggtctg
aaagtgcgtctgctggaaaatggtgccgtgtgcttcattccgggcagcctgatcctgaaa
gaccgcaagcgtttcgtctgcaaccatgacgaaggccgggcttatcttgatggtgaaatt
cactacgagttaggtcagaccattcaggtgaaattgcaggatgcgatcgaagcaacccgc
acgctggtggcgatcccaaccgagttgccgtctgcggcagcaccggtcacgaaggaagtg
ctggcagaatccgagcatgaactgatggacgaactgctgacggaaccggaagaaacggca
ccggaagaagatgaagcgtaa
DBGET
integrated database retrieval system
