Thermodesulfovibrio autotrophicus: V4D30_03910
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Entry
V4D30_03910 CDS
T10573
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
taut Thermodesulfovibrio autotrophicus
Brite
KEGG Orthology (KO) [BR:
taut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
taut03009
]
V4D30_03910 (rimO)
Enzymes [BR:
taut01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V4D30_03910 (rimO)
Ribosome biogenesis [BR:
taut03009
]
Prokaryotic type
ribosomal protein modification factors
V4D30_03910 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF1980_C
TRAM
Motif
Other DBs
NCBI-ProteinID:
XCH47425
UniProt:
A0AAU8GZK2
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All DBs
Position
complement(756904..758184)
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AA seq
426 aa
AA seq
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MKNFTVITLGCPKNTVDSRHLINELTAEGFLYVEEFKKADFVFINTCCFINDAKEESIDE
ILTAAKFKTDRLLIVFGCLSKRYGDELKKEIPEIDALFGVDETGKILNYMKQFKEYSGKK
LQEFQYTAEPPTYRYIKIAEGCSRRCSFCIIPEVRGPFRSIEPEKILKEAEKFISSGIKE
LILVAQDITQYGKDLKGYGLPELLKDLCSISGDFWVRLLYLYPTEIDEAIIQTVAENDKI
VKYLDIPMQHSEERILRLMGRRGTRKDYLKKIRQIREAIPGVTLRSTFIVGFPTETEDEF
QRLVDFIEELQFDRLGVFKYSREEGTKAYSLKGQIPESVKNRRFDEIMKRQALISLEKNR
ALVGKNFDALIDYVDADMAMARLYCHAPEIDGVVILENVSNLKAGEKLKLLITEAYEYDL
KGVIVS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattttacagtaattacactgggatgcccaaaaaacactgttgattcaaggcat
ttgataaatgaactcacagcagagggatttttatatgtggaggagttcaaaaaagcagat
tttgtctttatcaacacgtgctgttttataaatgatgcaaaggaagaatccattgatgag
attcttacagcagcaaagtttaaaactgacagattgctcattgtttttggctgtctttcg
aaaagatatggagatgaattgaaaaaagagatacctgaaattgatgccctttttggtgtt
gatgaaacaggtaaaatattaaattacatgaaacagttcaaagaatactcaggcaaaaaa
cttcaagagtttcaatatacagcagagccaccaacttacagatatataaaaatagctgaa
ggatgtagcagaagatgcagtttctgcataattccagaggtaagaggtccttttagaagc
atagagcctgaaaaaatacttaaagaagctgaaaaatttatttcctcaggaataaaggaa
ttaattctcgttgctcaggatatcacccagtatggaaaagatttaaagggatatggactg
ccagagcttcttaaagatttatgctccataagtggtgatttctgggtgagacttctttat
ctttatccaactgagattgatgaggctattattcaaacagtggcagaaaatgataaaatt
gttaaatatcttgacataccaatgcaacacagtgaagaaaggatactgaggctcatggga
agaaggggaacacggaaggattatcttaaaaagataaggcaaatcagagaagcaataccg
ggagtaacattgagaagcacctttattgttggctttcctactgaaacagaagatgagttt
cagagactcgttgattttattgaagagcttcagtttgacagacttggagtttttaaatac
tcaagagaagaaggcacaaaagcttacagtctaaaagggcagattcctgaaagtgttaaa
aatagaagatttgatgagataatgaaaagacaggctttaatatcccttgaaaaaaataga
gcactcgttggcaaaaattttgatgccctaatagattatgttgatgctgatatggcaatg
gcaagactttactgtcatgcaccagagattgatggcgtggtaatactggaaaatgtatca
aacttaaaagcaggagaaaaactaaaactgctcataactgaagcctatgaatatgatctt
aaaggagttattgtttcgtga
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