| Entry |
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| Symbol |
dnaE
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| Name |
(GenBank) DNA polymerase III subunit alpha
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| KO |
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| Organism |
taut Thermodesulfovibrio autotrophicus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:taut00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V4D30_04855 (dnaE)
03430 Mismatch repair
V4D30_04855 (dnaE)
03440 Homologous recombination
V4D30_04855 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:taut03032]
V4D30_04855 (dnaE)
03400 DNA repair and recombination proteins [BR:taut03400]
V4D30_04855 (dnaE)
Enzymes [BR:taut01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V4D30_04855 (dnaE)
DNA replication proteins [BR:taut03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V4D30_04855 (dnaE)
DNA repair and recombination proteins [BR:taut03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V4D30_04855 (dnaE)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(949480..952884)
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| AA seq |
1134 aa
MSIQEFVHLHVHTEYSLLDGAIRIDELIEQAKKYKMPAVAITDHGNLFGVVEFYKKATKA
GVKPIIGCEVYVAPQSRFDKTKIDKDPGMPEEASFHLTLLVEDEEGYRNLTRLVTLAYTE
GFYYKPRIDMELLSQHYKGLIALSGCLKGEIPYSIVRENIERAENTAKKLKDLFGENFFL
EIQSNSLAEQEIANKGLIEISKKFNIPLVATNDCHYLYRSDARAHEILLCIQTGKTIKDE
KRLKFQTDEFYFKSPDEMYSAFIEIPEALKNTLEIAERCNFHFKLGEYKLPKYHVPDGYS
AEEYLKRLAQEGLKERFNGNPSEDYINRLEEELKVITEMGFASYFLIVWDFINYARRKKI
PVGPGRGSAAGSLVAYALKITDIDPIKYGLLFERFLNPERISMPDIDVDFCKDRREEVIK
YVTEKYGIDRVAHIITFGTMAARAVVRDVGRALNIPYGEVDKIAKMIPFACPSLQQALNL
EPRLKELYDKSETVKELINIALRLEGLVRHASQHAAGVVISPEPLEDIMPLYKNPGEDTV
ISQFDMKALEDVGLLKFDFLGLKTLTVIDDTIKYVKAQGKDLRLENIPLDDEETYQLLCS
GQTTGVFQLESRGMRELLKRMEPQRFEDLVALVALYRPGPLGSGMVDDFIKRKKGVVPIQ
YDLPQLKEILDETYGVILYQEQVMKIANKIAGFTMGQADVLRKAMGKKIPELLMSLKEEF
VQGARRNGVPQDKAEALFNIMAAFAEYGFNKSHSAAYAYLAYITAYLKVHYPKEFFAANL
SNEMGDTNKIVKFINECKAWGIEIKGPDINESDRVFTVRENSIRFGLEAVKGVGGSALQC
ILNERKKKKFTSMTDFLSRVDTRKVNKKVIESLIKAGAFDSLYPQYTANQARAVAMHELL
SFKGNKLPGGLFLTEQIIEPWDNETLLSEEKAALGLYLTGHPMKPLRAVLNRMGICTIAE
IFDTAEDEIIETEQEQEIKIAGIVEEVKSKAKEKGVTAYITIEDETGRVEVVIYPELFKK
CSSILTEKNSIIINGIVFKSPDSTKFLARQIEDMKNLDLKIKYELSIDCSDTEKAYKTLK
EIRQCLEETRNGEGKVYICLNLPDCHVIILSPFEPCLDFETKIQKIENCQVRIL |
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| NT seq |
3405 nt +upstreamnt +downstreamnt
atgagcattcaggagtttgtccatcttcatgtgcatacagaatatagtctccttgatgga
gcaataagaattgatgaattaattgaacaggcaaaaaaatataaaatgcctgctgtggca
ataactgatcatggaaatctttttggagtggtggagttttataaaaaagccacaaaggca
ggtgtaaaacctattataggctgcgaggtatatgtagctcctcaaagtcgttttgataaa
acaaagatagataaagacccaggaatgccagaggaagcatcatttcatcttactttgctg
gtggaagacgaggaaggatacaggaatcttacccggctcgttactctggcttatactgaa
ggattttactacaaaccaagaattgatatggaacttttaagccaacactataaagggctt
attgctctttctggatgtcttaaaggagaaatcccatacagcattgttcgtgaaaacatt
gaaagggctgaaaatacagcaaaaaaattaaaagacctatttggagagaatttttttctt
gaaatccagtcaaacagccttgctgagcaggaaattgcaaataaaggattaattgagatt
tcaaaaaaatttaacattcctctggttgctaccaatgactgtcactatctttacaggtca
gatgcaagggcacatgaaattctgctttgcattcagaccggcaaaaccatcaaagacgaa
aaaagactgaagtttcagacagatgagttttactttaaatctccagatgagatgtattca
gcatttattgaaatccctgaggcactgaaaaatactcttgagattgcagagagatgtaac
ttccattttaaacttggtgaatacaagcttccaaaataccatgttcccgatggatactca
gcagaagaatatttaaaacgacttgctcaagaaggattaaaagagagatttaatggcaat
ccttctgaagattatataaatcgtctggaagaagaactcaaagttataacagaaatgggt
tttgcttcatattttctcattgtatgggattttataaattatgcaagacgaaaaaaaatc
cctgttggaccgggaagagggtcagcagcaggaagtcttgttgcttatgcactcaagatt
accgatatagatcccataaaatacgggctactttttgaaagatttttaaatcctgaaaga
ataagcatgcctgatattgatgttgacttttgtaaggacagaagagaggaggtaattaaa
tatgttacagaaaaatatgggattgacagagttgcacatattataacttttggaacaatg
gctgcaagagcggttgtaagagatgtgggaagagccttaaacattccctatggcgaggta
gacaaaattgcaaaaatgataccatttgcatgtccatctttgcagcaggctttaaattta
gaaccaagactcaaggaactttacgataaatctgaaacggtaaaagaattaattaacata
gctttaagacttgaaggacttgtaagacacgcatctcaacatgctgcaggagttgttata
tctcctgaacctcttgaagacataatgccactttataaaaatccaggtgaagatactgta
ataagccagtttgatatgaaagctcttgaagatgttggactacttaaatttgacttttta
ggtcttaaaaccctcactgttattgatgatacgataaaatatgttaaagctcagggtaaa
gatctgagactggaaaacattcctcttgatgatgaggaaacatatcaacttctttgctca
gggcagacaacaggagtatttcagcttgaaagtagaggcatgagagaattactcaagaga
atggagcctcagagatttgaagacctcgttgcccttgtagccttatacagacccggaccc
cttggcagcggtatggttgatgattttattaaaagaaaaaaaggagtcgttcccattcag
tatgatttaccgcaactcaaagaaatacttgatgaaacctatggagtaattctctatcaa
gagcaggttatgaaaattgctaataaaattgcaggtttcacaatgggacaggcagatgtt
ttaagaaaagcaatgggtaaaaagattccagaactgctgatgagtcttaaggaagagttt
gttcagggagcccgaagaaatggagttcctcaggacaaagcagaagctttattcaatata
atggcagcctttgctgagtatggtttcaataaatcccattctgcagcctatgcttattta
gcatacattacagcttacttaaaagttcattatcctaaggaattctttgccgcaaacctt
tcaaatgaaatgggagatacaaacaaaattgttaaatttatcaatgaatgcaaagcctgg
ggcatagagatcaaaggacctgacataaatgaaagcgacagagtctttactgtaagggaa
aattctataagatttggacttgaagctgtaaaaggagtaggaggctctgctcttcaatgt
attctcaatgagaggaaaaagaaaaaatttacatcaatgactgatttcctcagtagagtt
gatacaagaaaagttaataaaaaagtgatagaatccctaattaaagcaggagcatttgat
tctctttatcctcaatatactgccaatcaggcaagagctgttgcaatgcatgaactttta
tcctttaaaggcaataaactgccgggtggattatttcttactgaacaaatcatagagcca
tgggataatgaaactttactgagtgaggaaaaggcagcgcttggtctttatcttacgggt
catcccatgaaaccgctcagagcagttttgaataggatgggaatctgcacaattgctgaa
atttttgatactgcggaagatgagattattgaaactgaacaggagcaggagataaaaata
gcaggcattgtggaggaagtaaagagtaaagcaaaggaaaaaggtgttactgcttacata
acaatagaagatgagacaggtagggttgaggttgtaatttatcctgaactttttaaaaaa
tgtagcagtattctaacagaaaaaaactcaattatcattaatggcattgtatttaaatct
cctgattctacaaaatttcttgcaagacagatagaagatatgaaaaatctggatttaaaa
ataaagtatgaattaagtattgactgttcagacactgagaaagcttacaaaactttgaaa
gaaataagacaatgtcttgaagaaacccgtaatggagaaggtaaagtatatatatgttta
aatctccctgactgtcatgttataattttaagtccctttgaaccgtgtcttgactttgaa
acaaaaatacaaaaaattgaaaactgtcaggtgagaatactatga |
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