Thermodesulfovibrio autotrophicus: V4D30_06180
Help
Entry
V4D30_06180 CDS
T10573
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
taut Thermodesulfovibrio autotrophicus
Pathway
taut02020
Two-component system
taut02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
taut00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V4D30_06180
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V4D30_06180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taut03021
]
V4D30_06180
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
taut02035
]
V4D30_06180
Transcription machinery [BR:
taut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V4D30_06180
Bacterial motility proteins [BR:
taut02035
]
Flagellar system
Flagellar assembly proteins
Stator
V4D30_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
PARG_cat_N
HTH_24
MarR_2
TnsD
HTH_37
Rv2175c_wHTH
MADF_DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
XCH45921
UniProt:
A0AAU8GUJ0
LinkDB
All DBs
Position
complement(1200277..1200978)
Genome browser
AA seq
233 aa
AA seq
DB search
MFYSDDEKEKLIKQFLPKIKHLALRYHHIVQSVLELDDLISAGVKGLLEALNKYDPSLNV
PLSSFIEYRIRGAILDEIRSLDVFSKEFRKKVEDVKKTWKNLRQSGREPTDEEIAASLDI
TPQQLQEIYQSITASDVISLDNSLISQNGDRLNLLEVISDEKDIFEEINLREVKERLSAA
IESLSEIEKLVISLYYYEELNMKEIAQILGVSLSRVSQIHGKSLLKLKNFLEK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgttttattctgacgatgaaaaagaaaaacttattaaacagtttttgccaaaaataaag
caccttgctttaagataccatcatattgttcagtctgttcttgaactggatgatttaatc
tctgctggagtaaagggattgcttgaggcgttaaataaatacgatccttccttaaatgtc
cccctttcttcttttatagaatatagaataagaggagctatccttgatgaaattcgctct
cttgatgttttttcaaaggaatttcggaaaaaagtagaagatgtaaaaaaaacatggaaa
aatcttagacaatctggcagagaaccaacagatgaagaaattgcagcttctttagatatt
actcctcagcagttacaggagatttatcagagtataacagcttctgatgtgataagtctg
gataattctttaatcagtcaaaacggagacagattaaatcttcttgaagttatatctgat
gaaaaggatatttttgaagagataaatcttcgtgaagttaaagaaaggctttctgctgct
attgagagtctgtcagaaattgaaaaacttgttatctccctttattattatgaagaatta
aacatgaaagaaattgcacagattcttggagtttctctgtcaagagtgagtcagattcac
ggaaagtcactgttaaaattgaaaaattttcttgaaaaataa
DBGET
integrated database retrieval system
