Thermodesulfovibrio autotrophicus: V4D30_06930
Help
Entry
V4D30_06930 CDS
T10573
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
taut Thermodesulfovibrio autotrophicus
Pathway
taut02020
Two-component system
taut02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
taut00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V4D30_06930 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V4D30_06930 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taut03021
]
V4D30_06930 (rpoN)
Transcription machinery [BR:
taut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V4D30_06930 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Arg_repressor
Sigma70_r4
HTH_36
HTH_Tnp_ISL3
HTH_IclR
DUF1318
Motif
Other DBs
NCBI-ProteinID:
XCH46068
UniProt:
A0AAU8GWT9
LinkDB
All DBs
Position
complement(1351012..1352439)
Genome browser
AA seq
475 aa
AA seq
DB search
MALEQKAELRLTQKLALTPQLQLQLKLLQLPQLELSQFIELQLMENPMLELDEETENDHE
KEVSEEAEEPVAVDKLEKIMIDEYFAERADDGRDLGYFNPGIEEKPSFELFYSTTSDLWE
YLLWQLRLSKAPDEIRAVAEIIIGNIDEDGYLKATEEELAKIAETNIETVKKAIELVQGF
DPPGVAARDIKECLILQIKALDLGNTLVQSIVEEHLEDIRKKKYETIAKKFNVSVDEVTK
AVKIIEKLEPRPGRNFSKIHVNIPVPDVYVNRVEGEYQIILNDEGIPKLRLSKLYRQLFT
EKDLSSDEKKYLKEKFKNAVELLRSIEQRNRTIYRVTESLIKFQREFFDKGISYLKPLNL
KDVANDLGLHESTISRVTSNKYLACEHGVFSFRFFFSNALPSNHGSVSTTFVKELIQKII
SEENPANPLSDKEISDMLKKQGIDVARRTVAKYREELKIPPKSLRKQKIIKEETE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgaacagaaagctgagctaaggcttacgcagaaactggcactcacaccgcag
cttcagcttcagctaaagcttttacaactgccgcagcttgagctcagccagtttattgag
cttcaattaatggaaaatcccatgcttgaactggatgaagagactgaaaacgatcatgaa
aaagaagtttcagaagaagctgaagagcccgtagcagtggataaattagaaaagataatg
atagatgaatattttgctgagagagctgatgatggtagggatcttggttattttaatcct
ggcatagaagaaaagccttcctttgaacttttttactcaacgacctctgacctctgggaa
tatctcctgtggcaattgagattaagtaaagctccagatgaaataagggcagtggcggag
ataattattggcaacattgatgaagatggatatcttaaagcaacagaagaagaattagca
aaaattgcagaaacaaacattgaaactgtaaagaaagcaattgaacttgttcagggattt
gatcctccgggagttgctgccagggacataaaagaatgtttaatcctgcagataaaagcg
cttgatctgggaaataccctggttcagtctattgtggaagagcatcttgaagatataaga
aaaaagaaatatgaaaccattgcgaaaaaattcaatgtttctgttgatgaagtcactaaa
gcagtaaaaattatagaaaaacttgagccaagaccgggtagaaacttttctaagattcat
gtgaacattccagttcctgatgtttatgtaaacagggttgaaggtgaatatcagattata
ttgaatgacgaaggcattccaaagctgagactaagcaaactttacagacagctttttaca
gaaaaagatttatcttctgatgaaaagaaatatctgaaagaaaaatttaaaaatgctgta
gaacttttaagaagcatagagcagagaaacaggacaatttacagagtaactgaaagtctg
atcaagtttcagagagagttttttgataaaggcattagctacttaaaaccccttaatttg
aaggatgtggcaaatgacctcggacttcatgaaagcacaataagcagggtaacttcaaat
aagtatcttgcctgtgaacatggtgtgtttagtttcagattttttttcagtaacgctttg
ccatccaatcatggaagtgtttccaccacttttgtaaaggagctaattcaaaaaattata
agtgaggaaaatccagcaaatcctctttctgacaaggaaatttcagatatgttaaaaaaa
cagggcatagatgttgccagaagaactgttgcaaaatatagagaagagcttaaaatacca
ccaaaatctttgagaaaacaaaaaattattaaggaggagacagaatga
DBGET
integrated database retrieval system
