Thermodesulfovibrio autotrophicus: V4D30_07015
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Entry
V4D30_07015 CDS
T10573
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
taut Thermodesulfovibrio autotrophicus
Pathway
taut03420
Nucleotide excision repair
taut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
taut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V4D30_07015
03430 Mismatch repair
V4D30_07015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taut03400
]
V4D30_07015
Enzymes [BR:
taut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V4D30_07015
DNA repair and recombination proteins [BR:
taut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V4D30_07015
MMR (mismatch excision repair)
Other MMR factors
V4D30_07015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
NPHP3_N
AAA
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XCH46085
UniProt:
A0AAU8GVN7
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All DBs
Position
1365610..1367268
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AA seq
552 aa
AA seq
DB search
MNLNKNQKIAAETSEKICCVLAGPGTGKTLTITAKIIHLLQKGIKPQEIAALTFTQKAAI
EMKQRVINSLKQKENIPFIGTFHLLCLKLLREFLPDKEKHFQLCTRTKQREIISDLYGKN
ADKAIEKITKFKNTATPLDKNILLVYEKYEEKKRQLNLLDFDDLLLKTLELINKNQIPPL
FSYIIVDEFQDINKIQYELVKGLLKENGFLAVFGDPDQAIYSFRGSEIELFLKLPQDFPD
LTLINLSLNYRSQKNIIEASNKFITANTKRFSKRVEATRKIKSPLILFEVEDEHEEARII
VKEIKSRVGATDFTELYKNKEETPYSFSSFAVLTRTNAQLKIIKDFLKKEGIPVKTIKKD
AEHWISSIIKKLTEVMSNSSEKLFTNMPLKDFLESFGIYEGLSEMEIFMLSNMAKTYKNG
KLIEQIQAFIDEVSAMTPLDLFPESLNAVSLLTLHSSKGLEFPVVFIAGFDEGLIPYTLA
SDTDVEEERRLFYVGMTRAMDDLILIHSRQRLINEKKLNMCVSSFLKDIPAEYIKIKKVR
SNRTGPRQKGLF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaataaaaatcaaaaaatagcagcagaaacttcagagaaaatatgctgtgtt
cttgcaggtcctggcactggtaaaactcttacaataactgcaaagatcattcatctactg
cagaaaggtataaaacctcaggaaattgctgcacttactttcacccaaaaagcagccatt
gaaatgaagcagagagttataaatagcctgaaacaaaaagaaaacataccttttataggc
acctttcatcttttatgcctaaaacttttaagagaatttttgccagataaggaaaagcat
tttcaactatgcacaagaacaaaacagagagaaataatctctgatttatacgggaaaaat
gccgataaagcaattgaaaaaataacaaaattcaaaaatacagctacacctctggataaa
aacatcttactggtctacgaaaaatacgaagaaaaaaagagacagcttaatcttctcgat
tttgatgatctattgctaaaaactcttgaattaatcaataaaaaccagattccacctctt
ttttcttatataatcgttgatgaattccaggatataaacaagattcagtatgaacttgta
aaaggattgctcaaagagaatggttttcttgcagtatttggtgatcctgaccaggctatt
tattctttcagaggctcagaaattgaactttttttaaaactaccacaagattttccagat
ttaactcttataaatctgtctcttaattatcgttctcagaaaaatataatagaagcttca
aataagtttatcacagcaaacacgaaaaggttttctaaaagagttgaagctacaagaaaa
ataaaatctcctctaatcctttttgaagttgaagacgaacatgaggaagccagaatcatt
gttaaagaaataaagtcaagagttggtgcaacagattttacagaactctataagaacaaa
gaagaaacaccctatagtttttcaagttttgcagttcttacaagaacaaatgctcagctt
aaaatcattaaagattttttaaaaaaagaaggaatcccagtaaaaactataaagaaagat
gcagaacactggatatcttcaattataaagaaacttactgaagtaatgagtaactcatcg
gaaaaactttttacaaatatgccattaaaagattttcttgaatcatttggaatctatgaa
ggattatcagaaatggaaatctttatgttaagcaacatggcaaagacatataaaaatggc
aaacttatagagcagatacaggcattcattgatgaagtctccgcaatgacacctcttgat
ctatttccagaaagcctgaatgcagtaagcctgcttactcttcacagttcaaagggtctt
gaatttcctgttgttttcatcgcaggttttgatgagggtctgattccctatactctggca
tctgatactgatgtagaggaagaaagaaggctcttttatgttggaatgacacgggcaatg
gatgacttaatacttattcattcaaggcaaagactcataaatgagaaaaaattaaatatg
tgtgtttcttcttttcttaaagatataccagcagaatacataaaaataaaaaaggtccgg
tcaaacagaaccggaccaagacaaaaaggtcttttttaa
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