Thermodesulfovibrio autotrophicus: V4D30_07330
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Entry
V4D30_07330 CDS
T10573
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
taut Thermodesulfovibrio autotrophicus
Pathway
taut03420
Nucleotide excision repair
taut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
taut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V4D30_07330
03430 Mismatch repair
V4D30_07330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taut03400
]
V4D30_07330
Enzymes [BR:
taut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V4D30_07330
DNA repair and recombination proteins [BR:
taut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V4D30_07330
MMR (mismatch excision repair)
Other MMR factors
V4D30_07330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
DUF3553
Motif
Other DBs
NCBI-ProteinID:
XCH46148
UniProt:
A0AAU8GXX6
LinkDB
All DBs
Position
complement(1425475..1427574)
Genome browser
AA seq
699 aa
AA seq
DB search
MKDFPLSELNPAQQEAVLYCEGPLLVLAGAGSGKTRVITYKYAYLKEAMGFHPSSIFTVT
FTNKAADEMKERIFKICNGTLKNPWIGTFHSLCVRILRAQIEKIGYKKDFIIYDEDDQAG
LIKRILKDLNMHEALCKCVVNKISNLKSNLVTPEDYISNIEGYEFEERLGRIYMRYQTEL
QKCNALDFDDLILCVIRLFRENEDLLRRYSEQFRYVLVDEFQDTNKSQYELLQLLCKYHG
NICAVGDDDQSIYKFRGANVYNILNFEKDFPKTKVVKLEQNYRSTKHIILASTAMISKNP
MRKPKSLWTERDWGEKVFYCQLSNEEEEAKYIAKNIKELYLKGEYEFRDFAILYRLVLQA
RALEEALRMEGIPYQVISGVSFYHRKEIKDVLAYMRFILNKEDNVSLMRIINTPPRGIGA
GALLKIENEAKKHMISTYEAIKKMIKDDSVAVNLKEKLLSFTTIIDELSEKEYQDAASMI
RDILNLTGYLEEIEEDRIQNVLELLSSAEKVSLREFLDKVALLSSVDTWENRKNGVCLLT
LHAAKGLEFPVVFIVGCEEGILPYFKALEDPVELQEERRLFYVGMTRAKNLLYLTSVRQR
KLYSKVQKQEPSSFIKDIPPEYCTCIRKDYSSFTPEKKESEKSRVKHPFVIGCKVKHPTW
GVGVVRDCYGEGDDLKVVVNFPGIGVKKLAPKIVNLERV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttccctctgtcggaattaaatccggcacaacaggaagcagttctttactgt
gaaggtccacttcttgttcttgcaggagcaggaagtggtaaaacaagagtgattacttat
aagtatgcctatctcaaagaagcaatgggattccatccatcttccatattcaccgtaact
tttacaaataaggcagctgatgaaatgaaggaaagaatctttaaaatctgtaacggcact
cttaaaaatccttggataggaacattccattcactctgtgtaagaatactgcgagctcaa
attgaaaaaattggttataaaaaagactttatcatttatgacgaagatgatcaggcaggg
ctgataaagagaatcttaaaagatctgaacatgcatgaagctttatgtaaatgtgttgtg
aacaaaataagcaatcttaaatcaaatctggtcactccggaagattatatctcaaatatt
gaaggttacgagtttgaagaaagactgggcaggatatatatgcgataccagacagagctt
caaaaatgcaatgctctggattttgatgatctgattctttgcgtaataaggttattcagg
gaaaatgaagatttactcagacgatactctgaacagttcagatacgtacttgtggatgaa
tttcaggataccaataaatctcagtatgaactgttacaacttctttgcaaatatcatgga
aatatctgtgctgttggagatgatgatcagagtatttacaaattcagaggagcaaatgtt
tataacattcttaactttgaaaaagactttccaaagacaaaagtagttaaactggagcag
aattatcgttctacaaagcatataattcttgcctcaactgccatgatttcaaaaaatcca
atgagaaaaccaaaatctctctggacagaaagagattggggtgaaaaagttttttactgt
caattgagcaatgaagaggaagaagcaaagtacatagcaaaaaatataaaggaactttat
cttaaaggtgagtatgaatttagagattttgcaattctttacagattggttcttcaggca
agagctctggaagaggctttgcgtatggaagggataccctatcaggtgataagtggagta
agcttttaccaccgtaaagaaataaaagatgtgcttgcttacatgcgatttattttaaac
aaagaagacaatgtaagccttatgagaatcataaatactcctccaaggggaattggagca
ggagctttattaaaaattgaaaatgaagctaaaaaacatatgatatcaacctatgaagca
ataaaaaaaatgataaaagatgattctgttgctgttaatttaaaagaaaagcttttatcc
tttaccacaattatagatgagctttctgagaaagagtatcaggatgctgcgtcaatgata
agggatatattgaatcttactggatatcttgaggaaattgaagaggacagaattcagaat
gttttagagcttcttagttctgcagaaaaagtatcattaagggaatttcttgataaagtt
gctcttctttcaagcgtggatacatgggaaaacaggaaaaacggagtctgtcttcttacc
cttcatgcagccaagggacttgagtttccggtggttttcatcgtaggctgtgaagaggga
attttaccttactttaaggcacttgaagatcctgtggaattacaggaagaaagaaggctt
ttttatgtgggaatgacaagagccaagaatcttttataccttacaagtgtaaggcagaga
aagctttattcaaaagttcagaaacaggagccatcaagctttatcaaagacattccacct
gaatactgcacatgcatcagaaaagattattcctcatttactccagaaaaaaaggaatca
gaaaaatccagggtcaagcatccatttgtgataggatgcaaagtaaagcatcccacatgg
ggagttggagttgtaagagactgttatggagaaggagatgatttaaaggttgttgttaac
tttccaggcataggggttaaaaaattagctccaaaaattgtaaacttagagagggtgtaa
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