KEGG   Thermodesulfovibrio autotrophicus: V4D30_07555
Entry
V4D30_07555       CDS       T10573                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
taut  Thermodesulfovibrio autotrophicus
Pathway
taut03030  DNA replication
taut03430  Mismatch repair
taut03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:taut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V4D30_07555
   03430 Mismatch repair
    V4D30_07555
   03440 Homologous recombination
    V4D30_07555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:taut03032]
    V4D30_07555
   03400 DNA repair and recombination proteins [BR:taut03400]
    V4D30_07555
Enzymes [BR:taut01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V4D30_07555
DNA replication proteins [BR:taut03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     V4D30_07555
DNA repair and recombination proteins [BR:taut03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     V4D30_07555
SSDB
Motif
Pfam: RNase_T DEDDh_C Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: XCH46189
UniProt: A0AAU8GUG1
LinkDB
Position
1471724..1472413
AA seq 229 aa
MLSIFRKKKKIPEYKGISIAETEFTVVDTELTGLNELRDTIIAIGGIKMKGKSIKMGEIF
YRTIKPDRFVKKDSIMVHEITPSELEECPDIAPILREYLSFVRNSVIVGHCISIDIAFLK
KAIHRHLKESYEPMAVDTFVIYKWLIHKGLLPENFINNKSLKDVAISLGIEPKELHDALV
DAFITAQVFQKIITLLGDIKIYTTQELMDIGNPNISGYMGVEKKQAFQL
NT seq 690 nt   +upstreamnt  +downstreamnt
atgctttcaatatttagaaaaaagaaaaagattcctgaatataaaggaatatcaattgca
gaaacagagtttacagttgtggatactgaacttacaggactaaacgaattgagggacaca
attattgctattggaggcataaaaatgaagggtaaatcaataaaaatgggtgaaatattt
tacaggactataaaaccagacaggtttgtaaaaaaagacagcataatggttcatgagatt
acaccatcagaactggaagaatgtcctgacatagctccaattctgagagagtatctttct
tttgtaaggaattcagtcattgtagggcattgtatatcaattgatattgcttttcttaaa
aaggcaattcacagacacctcaaagagagctatgagcctatggcagtagatacttttgtt
atttataaatggcttattcataaggggttattaccagagaactttataaataataaatca
ttaaaggatgtggctatatcacttggcattgaaccaaaagagttgcatgatgcactggtt
gatgcttttattactgctcaggtttttcaaaagataataacattacttggagatattaag
atttatactacccaggaactcatggacatagggaatcccaatatatccggatatatggga
gttgaaaaaaaacaagcatttcaactttaa

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