Thermodesulfovibrio autotrophicus: V4D30_07555
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Entry
V4D30_07555 CDS
T10573
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
taut Thermodesulfovibrio autotrophicus
Pathway
taut03030
DNA replication
taut03430
Mismatch repair
taut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V4D30_07555
03430 Mismatch repair
V4D30_07555
03440 Homologous recombination
V4D30_07555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taut03032
]
V4D30_07555
03400 DNA repair and recombination proteins [BR:
taut03400
]
V4D30_07555
Enzymes [BR:
taut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V4D30_07555
DNA replication proteins [BR:
taut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V4D30_07555
DNA repair and recombination proteins [BR:
taut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V4D30_07555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XCH46189
UniProt:
A0AAU8GUG1
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All DBs
Position
1471724..1472413
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AA seq
229 aa
AA seq
DB search
MLSIFRKKKKIPEYKGISIAETEFTVVDTELTGLNELRDTIIAIGGIKMKGKSIKMGEIF
YRTIKPDRFVKKDSIMVHEITPSELEECPDIAPILREYLSFVRNSVIVGHCISIDIAFLK
KAIHRHLKESYEPMAVDTFVIYKWLIHKGLLPENFINNKSLKDVAISLGIEPKELHDALV
DAFITAQVFQKIITLLGDIKIYTTQELMDIGNPNISGYMGVEKKQAFQL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaatatttagaaaaaagaaaaagattcctgaatataaaggaatatcaattgca
gaaacagagtttacagttgtggatactgaacttacaggactaaacgaattgagggacaca
attattgctattggaggcataaaaatgaagggtaaatcaataaaaatgggtgaaatattt
tacaggactataaaaccagacaggtttgtaaaaaaagacagcataatggttcatgagatt
acaccatcagaactggaagaatgtcctgacatagctccaattctgagagagtatctttct
tttgtaaggaattcagtcattgtagggcattgtatatcaattgatattgcttttcttaaa
aaggcaattcacagacacctcaaagagagctatgagcctatggcagtagatacttttgtt
atttataaatggcttattcataaggggttattaccagagaactttataaataataaatca
ttaaaggatgtggctatatcacttggcattgaaccaaaagagttgcatgatgcactggtt
gatgcttttattactgctcaggtttttcaaaagataataacattacttggagatattaag
atttatactacccaggaactcatggacatagggaatcccaatatatccggatatatggga
gttgaaaaaaaacaagcatttcaactttaa
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