Thermodesulfovibrio autotrophicus: V4D30_08035
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Entry
V4D30_08035 CDS
T10573
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
taut Thermodesulfovibrio autotrophicus
Brite
KEGG Orthology (KO) [BR:
taut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taut03032
]
V4D30_08035 (gyrB)
03400 DNA repair and recombination proteins [BR:
taut03400
]
V4D30_08035 (gyrB)
Enzymes [BR:
taut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
V4D30_08035 (gyrB)
DNA replication proteins [BR:
taut03032
]
Prokaryotic type
DNA Topoisomerases
V4D30_08035 (gyrB)
DNA repair and recombination proteins [BR:
taut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V4D30_08035 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
HATPase_c_2
Toprim_4
MRPL52
Motif
Other DBs
NCBI-ProteinID:
XCH46284
UniProt:
A0AAU8GV32
LinkDB
All DBs
Position
complement(1560954..1563188)
Genome browser
AA seq
744 aa
AA seq
DB search
MNKEETYRVEDIKILKGLEGVRARPAMYIGSTGIEGLHHLVYEVVDNSVDEALAGFCNKI
EVYLHKDGSCTVSDNGRGIPIGTHPEDPEGRTALEIVLTELHAGGKFESKAYKVSGGLHG
VGLSVVNALSEELEVEVKREGKVVRQKYCRGIPQESPKVVDQTTATGTKIRFKPDPEIFE
VTEFSREILAERFKELAYLNKGLKIILTDERNGYSEEFIKEGGIVSFVEDLNRNKKPLHP
KPIYISGEKDRIIVEIAIQYNSGFSEEILTFVNNINTKEGGTHLVGFKSALTRTINTYAL
QNGLLKEGKESLSGEDVREGIVAVISVKIPEPQFEGQTKMKLGNSEVKGIVETIVNEKLS
RWLEENPNYARKIVEKAKEAARAREAAKKAKELTRRKGILEDTSLPGKLADCTEKDPSQA
ELFIVEGDSAGGSAKQARDRRTQAVLPLRGKILNVEKARIDKMLTSEEIKTLITAIGGGI
GKENFEPENIRYHKIILMTDADVDGAHIRTLLLTFFYRQMLPLIEKGWLFIAQPPLYRIK
RGKWEKYIQTEEEMNEFLMDIAVDELSLIVQTDLETKKNFLRLLFDYGRVLEDFERKGFA
PSYIEQMLRTPEEQTRISELKDFILLKNIFEKLQSIQEIKEDKNYVIQIKNEVVKTPSLW
ELYSKIMDSVKKGLTIQRYKGLGEMNPEQLWETTMDPEKRTLLQVTVEDAQKANEIFTIL
MGDDVEPRKEFIVKHALEAKNLDI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagaagaaacctacagggttgaagacataaaaattcttaaggggcttgaaggt
gtaagagcccgtcctgcaatgtatattggctctactggaattgaaggattacatcatctt
gtttatgaagtggtggacaatagtgtggatgaggctttagcaggattctgtaataaaatt
gaagtttacctgcataaagatggaagttgtactgtaagtgataatggtagaggtattcca
ataggaactcatcctgaagatcctgaaggtagaactgctcttgagattgttcttacagag
cttcatgcaggtggtaagtttgaatccaaggcttacaaggtttcaggtggacttcatgga
gtaggattaagtgttgttaatgccctttctgaggaacttgaggttgaagtaaaaagagaa
ggtaaagtagtaaggcagaagtattgtcgtggaatacctcaggaaagccccaaagttgtg
gatcaaacaacagccacaggcactaaaataagatttaaacctgatcctgaaatatttgaa
gttacagagttttcaagagagattcttgctgagagatttaaggaactggcttatttaaac
aaaggattgaaaattattcttacagatgaaaggaatggctactctgaggaattcataaaa
gaaggtggaatagtttcttttgttgaagatttaaacagaaataaaaagcctttacatccc
aagccaatatatatttcaggtgaaaaagacagaattattgttgaaatcgccattcaatac
aattcaggtttttcagaggaaattcttacctttgtcaataacattaatacaaaagaaggt
ggcactcatttagtaggttttaaatctgctcttacaagaacaataaatacttatgctcta
cagaatggacttttaaaagaaggcaaagagtctctttccggtgaggatgtaagagaaggt
attgttgctgtaataagtgtgaagattccagagcctcagtttgaagggcagacaaaaatg
aagcttggcaacagcgaggtaaaaggaattgtagaaacaatagttaatgaaaaactcagt
agatggcttgaggaaaatcctaattatgcaaggaaaatcgttgaaaaagcaaaagaggct
gcccgtgcccgtgaagcagctaaaaaagcaaaagaacttacgcgcagaaaaggtatactt
gaagatacatcgcttccaggaaaacttgctgactgcactgaaaaggacccttctcaagca
gaactctttattgttgagggtgacagtgcaggtggttcggcaaagcaagcaagggacaga
agaactcaggcagtgcttccactgagaggtaagattttaaatgtagaaaaggcaagaatt
gacaaaatgttgacctctgaagagataaaaactcttatcaccgcaattggaggaggtatt
ggaaaagaaaactttgagcctgaaaacatcaggtaccataaaataattcttatgacagat
gctgatgttgatggagctcatataagaacccttcttttaacatttttttacaggcagatg
cttcccttgattgaaaaaggctggcttttcattgctcaaccaccactttatagaataaag
agaggtaaatgggagaaatatattcaaacagaggaggaaatgaatgagtttttgatggat
attgcggttgatgagctctcattaattgttcaaacagatttagaaacaaagaagaatttt
cttagattactttttgattatggaagggttcttgaagattttgaaagaaaaggttttgca
ccatcttatattgagcagatgctcaggactcctgaagagcaaaccagaatttccgagtta
aaggattttatccttcttaagaacatctttgaaaaacttcaatcaatccaggaaataaaa
gaagataaaaattatgtcattcagattaaaaatgaagtggtaaaaacaccatctctatgg
gagctttacagtaaaattatggattctgtaaaaaaggggcttacaattcagagatataaa
ggacttggtgaaatgaatccagaacagctatgggaaaccacgatggatcctgagaaaaga
actctgctgcaggttacagttgaggatgctcaaaaggcaaatgagatatttaccatactt
atgggagatgatgttgaaccaagaaaggaatttattgtaaaacatgctcttgaagcaaaa
aatcttgacatttag
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