Thermosulfuriphilus ammonigenes: G4V39_04190
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Entry
G4V39_04190 CDS
T06469
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tav
Thermosulfuriphilus ammonigenes
Brite
KEGG Orthology (KO) [BR:
tav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tav03016
]
G4V39_04190 (thpR)
Enzymes [BR:
tav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
G4V39_04190 (thpR)
Transfer RNA biogenesis [BR:
tav03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
G4V39_04190 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Exog_C
Motif
Other DBs
NCBI-ProteinID:
QIJ71526
UniProt:
A0A6G7PVE1
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All DBs
Position
complement(866598..867170)
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AA seq
190 aa
AA seq
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MVRTFLAIPLPASVKETLARLIKELRETSADVRWVRPEGIHLTLWFFGSLSEDRLARLKE
ALARESLGESFQLKGQGLGTFPPGGRPRVIWVGVSGDLDRLRELKRRLDKIVVPLGFEPE
RRPFTPHFTLGRVKSTRGLARLLKALSHLKEAVSLPPFEVREIVLYRSDLRPDGACYTPL
RRYPLQGGGS
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggactttcctggctatccctctacctgcttcggttaaagagaccttggctcga
cttattaaggagctcagagagacctcggccgacgtccgttgggttcgaccggaggggatt
cacctgaccctctggttctttggttctctaagtgaggaccgccttgctcgcctcaaggag
gccctggcccgggagagcctgggtgaatctttccagcttaaaggacaaggcctcggtacc
tttccccccggggggcgtccccgggtaatctgggtgggggtctctggagatcttgatcgc
ctaagggagcttaaaagaaggctagataagattgtggtccctttaggctttgaaccggag
aggcggccctttacccctcactttaccctggggcgggttaaatccactcgggggctggcc
cggcttcttaaggccctttcccacctcaaggaagccgttagtctccctccttttgaggtg
cgagaaattgttctttatcgaagtgatcttcggccagacggggcatgctacacacccctt
agacgctatccccttcaaggaggagggtcatga
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