Thermosulfuriphilus ammonigenes: G4V39_04235
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Entry
G4V39_04235 CDS
T06469
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tav
Thermosulfuriphilus ammonigenes
Brite
KEGG Orthology (KO) [BR:
tav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tav03016
]
G4V39_04235
Enzymes [BR:
tav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
G4V39_04235
Transfer RNA biogenesis [BR:
tav03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G4V39_04235
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QIJ71535
UniProt:
A0A6G7PV27
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All DBs
Position
complement(875005..877002)
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AA seq
665 aa
AA seq
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MSEFSTNPTGRIVEYLEQNRFFTAVVTGLKDRRLRLINHLGREVLLPRSRLLHMSQAPLK
GLGRSEAVAALVRRHQRREELAREIDLVTLWELVSGEMEEAEPQDLAEIYFGQEADDDQV
AALVRAVLEDKTYFRFRDGRIIVNPPEVVTQIIERREAEARRIRLLQEGSAFLKALWRGE
KTDVSPEVKEFVIGLLRDFCLEGEAAREAAMAKDLLKRAELNRPGAPFELLVKAGVFSPD
ENLDLLRYEIRADFPPEVELEARNLANSPRIGQREDLRSLELFTIDGEETTDYDDALHLR
PLPDGLWEVGIHIADVAAYVPPQSRVFEEALDRAQTIYLPDLKIPMLPPSLSEESCSLKA
GEDKLALSFFIILDSSGEVRSFRLQPSLIRVRKNLVYEEVDGLLKTSPWEELYRLALILK
EKRIEAGALPLPIPEVVIRIKDGRVILEKLEITGSRALVAEMMILANYQAARFLQDSGVP
ALFRSQPPPRERLIHGSETDLLKNFIQRRAISRGSLSTSAEPHHGLGLPVYTTVTSPIRR
MLDLIVQHQLKGALSGQPPFSQEDLEEMAQRLEVATGVANTVKYRRHRYWLLRYLEEHRR
RSFAGLVIDLNQRRAQVLLLEPMLVVDVPLSPGQPLEVGQEVEVVILKVNAREDVIKAAL
ASQPR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagttttcgaccaaccccactggtcggatagtggagtatctcgaacagaatcgt
ttctttaccgcggtggtgacggggctcaaagaccgccgtctgcgcctcataaaccattta
ggacgggaggtccttctgccccgcagccgcctgctccatatgtctcaagccccccttaag
ggccttggtcgtagcgaggccgtggccgccctggtccggcgtcaccagagacgggaagag
ctcgcccgggagatagatctcgttaccctctgggagctagtctccggcgagatggaagag
gctgagccccaggatctggccgagatatactttggtcaagaggccgatgacgaccaggtg
gccgctttggtgcgggcagttctggaagacaagacttattttcgttttcgcgacggacga
atcatcgtcaatcctccggaggtggtcactcagatcattgagcgccgggaggctgaagcc
cggcgtataagactcctccaggagggcagcgcctttcttaaggccctctggcgtggggaa
aaaacagatgtctctccagaggtcaaggagtttgtcatcggccttcttcgggatttctgc
cttgagggagaggccgcccgggaggctgccatggccaaagatctcctcaaaagggccgag
cttaatcgtcccggggctccctttgaacttctggtcaaggccggcgtgttcagcccggat
gaaaaccttgatctccttcgctatgaaatcagggccgactttcccccggaggtggaactt
gaggcccggaacctagcgaattccccccggataggccagcgggaagatctccgttccctt
gaactttttaccatcgatggcgaagagacaaccgactatgatgacgccctccacctgcgc
cccctcccggacggcctttgggaggtcggaattcatattgccgacgtggccgcctatgtc
cccccgcagtcccgggtgtttgaggaggccctggaccgggcccagaccatctatcttccg
gacctcaagatccccatgcttcctccctccctttcggaggaatcctgtagccttaaagcc
ggggaagataagctggctctttccttttttatcatccttgattcctcaggagaggtccgt
tcctttaggcttcagccgagtctgataagggtccggaaaaatctggtctatgaggaggtc
gatggcctccttaaaacgtctccctgggaggagctctaccgtttggcccttattctcaag
gagaagcggatcgaggccggggccctgcctcttcctatacctgaggtggtcattcggata
aaagatggccgggtgatcttggagaagctggagatcaccggcagtcgggccctggtggca
gagatgatgatcttggccaactatcaggcggcccgttttcttcaagactcgggggtgccg
gccctcttccggagccaaccgcctcccagagagcgccttattcatggctcggagacggat
cttctcaagaatttcatccagcgccgggccataagtcgaggtagcctttctacttcggcg
gagcctcaccacggcttggggctccccgtctataccacggttacctctcctatccggcga
atgctggaccttattgttcagcaccagttgaagggggccctctctggccagcctcccttc
agccaggaagatcttgaggaaatggcccagcggctggaagtggccaccggggtggccaat
acggttaaatatcgtcgtcatcgctactggctcctgcgctatctggaggagcaccgccgg
cgttcctttgccggcctggttatagacctcaatcagcgtcgggcccaggtgcttctgctc
gaacccatgctagtggtggatgttcccctttcgccgggacaacccttagaggttggccag
gaggtcgaggtggttatcctaaaggtaaatgcccgggaggatgtaattaaggcggccctg
gctagtcagccacgataa
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