Thermosulfuriphilus ammonigenes: G4V39_04600
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Entry
G4V39_04600 CDS
T06469
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tav
Thermosulfuriphilus ammonigenes
Pathway
tav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G4V39_04600 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tav03019
]
G4V39_04600 (pnp)
03016 Transfer RNA biogenesis [BR:
tav03016
]
G4V39_04600 (pnp)
Enzymes [BR:
tav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G4V39_04600 (pnp)
Messenger RNA biogenesis [BR:
tav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G4V39_04600 (pnp)
Transfer RNA biogenesis [BR:
tav03016
]
Prokaryotic type
tRNA degradation factors
G4V39_04600 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
PCB_OB
DUF5813
DUF3016
Motif
Other DBs
NCBI-ProteinID:
QIJ71599
UniProt:
A0A6G7PV93
LinkDB
All DBs
Position
complement(947214..949349)
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AA seq
711 aa
AA seq
DB search
MIKKAELEIGGRNFVLETGRVARQASGSVIVRYGDTVVLVTAVSSKEIREGIDFLPLLVE
YQEMYYAAGRIPGSYFRREIGRPSEKETVTARLIDRPLRPLFPKGYRYDTQIIATVLSVD
PEIDPDVLAITGASAALHLSHIPFAGPVAGVRIGRVNGEFVVNPTTSEVRASDLNLVIAG
TKEAICMVEGSAREVPEEVVLEALFLAHEEIKRLVAVQEELRAECGQPKMAFEEPQTDEA
LKKRLLDLFEADLREVITTPVKVERGRRRQELELKVLEQLGEEVSGREKEVLSLLKEIEK
EMMRAMIAREKRRIDGRAFDEVRPISCEVGLLPRTHGSALFTRGETQVLVIVTLGSTQDE
QRIEAPGGEVFKHFMLHYNFPPYCVGEVRPLRGPSRRDIGHGLLAERALLAVVPDQEEFP
YTIRVVSEVLESNGSSSMATVCGGTLSLMDAGVPIKDMVAGVAMGLIKEDNQFYTLTDIL
GDEDHLGDMDFKVAGTDKGITALQMDIKITGVTREILSQALDQAREARRFILSKMREVIS
KPREALSAYAPRLTTIQISPNKIRDLIGPGGKTIKGIIAACEDVKIEVEDSGLVRIFAPN
TEAAEKAIKMIREVTQEAEVGKLYLGRVTRITDFGAFVEIFPGTTGLIHISQMDKGRVRS
VSDILKEGDEVLVKVIDIDRQGRIKLSRRAALEESMRRLREEKDEDSVDIT
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaagcagagttagaaatcggcgggcgaaatttcgtcctggagacagggcgg
gtggccaggcaggccagtggttcggtgattgtccgctacggcgacaccgttgtcctggtg
acggcggtcagttctaaggagatccgtgaggggatagattttctccccctgctggtggaa
tatcaggagatgtattacgctgcgggccgtattccgggaagctattttcggcgggagatc
gggcgtcccagcgagaaggaaacggtgaccgccaggctcattgaccgtcccctgcggccc
ctctttcctaagggctatcgttatgatacccagatcatcgctacggtgctctctgtagat
ccggagatcgacccggatgttctagccattaccggagcctctgccgcccttcatctttct
cacattccctttgctggcccggtggccggagtaaggattggccgggtaaacggagaattt
gtcgttaaccccaccacctcagaagtcagggcctcggatcttaacctagttatcgccggc
accaaagaggccatctgcatggtggagggctctgcccgggaggttcccgaggaggtggtc
cttgaggccctctttttggctcatgaggagatcaagcgtctggtggccgttcaggaggag
cttcgggccgagtgtggccaaccgaagatggccttcgaagagcctcaaactgatgaggcc
ctcaagaagcgcctccttgatctctttgaagccgatctgcgggaggttatcaccacacca
gttaaggtagagaggggacgccggcgtcaggaactggagcttaaggttcttgagcagttg
ggtgaggaggtcagtggtcgagagaaggaggtcctcagtctccttaaagagatagaaaaa
gagatgatgcgggccatgatcgcccgagagaagcggcgtatcgatggccgggcctttgat
gaagtgcggcctataagttgtgaggtgggccttttgccccggacccatggttcggccctc
tttacccggggtgagacccaggttctggttatcgttactctgggaagcacccaagacgaa
cagcgtattgaggcccccgggggagaggttttcaaacattttatgcttcactacaacttc
ccgccatattgtgtgggtgaagtccggcccttgagggggccatcacgacgggatataggc
catggtcttctggccgaaagagcccttctggcggtagtccccgatcaggaagagtttcct
tacaccattcgggtggtttctgaagtcttggaatctaacggttcctcttctatggctact
gtctgcggtggaaccctatcccttatggatgccggggttcccatcaaggacatggtcgcc
ggggtggccatggggctcattaaagaagacaaccagttctacacccttaccgatatcctc
ggcgatgaagaccatcttggagatatggactttaaagtcgccggtaccgacaagggaatt
actgccctgcagatggatatcaagattaccggtgttacccgggagatcctctctcaggct
ttggatcaggcccgggaggcccgccgctttatcctttctaaaatgagggaggttatcagt
aaacctcgggaagccctttctgcttacgccccccggctgaccaccatccaaataagcccc
aacaagattcgggatctcatcggcccagggggcaagaccatcaagggcattatagccgcc
tgtgaagacgtcaagatagaggtggaagactccgggctggtgcgaatatttgcccctaat
accgaggccgcggagaaggccatcaagatgatccgagaggtgacccaggaggccgaggta
ggcaagctttacctgggccgggtgacccgaattaccgactttggggcctttgtggagatc
tttcccgggactaccggtctgatccatatctctcagatggacaagggccgggtgcgcagc
gtctctgacattctcaaagagggagatgaggtcctggttaaggtgattgatatcgaccgt
cagggtcgaataaagcttagtcgccgggccgcccttgaggagtctatgcgtcgtcttcgg
gaggaaaaagacgaagactcggtagatatcacctga
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