Thermosulfuriphilus ammonigenes: G4V39_06245
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Entry
G4V39_06245 CDS
T06469
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
tav
Thermosulfuriphilus ammonigenes
Brite
KEGG Orthology (KO) [BR:
tav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tav01011
]
G4V39_06245
Enzymes [BR:
tav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
G4V39_06245
Peptidoglycan biosynthesis and degradation proteins [BR:
tav01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
G4V39_06245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
HTH_38
LysM1_NFP_LYK
HTH_23
LysM_RLK
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
QIJ71887
UniProt:
A0A6G7PWC1
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Position
complement(1286872..1288200)
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AA seq
442 aa
AA seq
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MRLGIIVALLVLFLSTAEILASSKTSLTSLEVSPDYSSLTGEAEDESEEGELFDSSAFQG
ANLPLTLNEKVQYFIELYQTSQREVFKLWLSRSTRYLPMIKRIFREYGLPEDLAYLAMIE
SGFNPFAYSRARAVGMWQFIKGTARRYGLKVNYWIDERRDPEKATKAAARYLLDLYQEFE
CWHLASAGYNAGETKIRKAIRRYKTKDFWELAKYRYLKRETKNYVPALIAAILIAKNPEK
YGFTDVKYLPPLEYEKIEVPGNISLKAIALAAGVDYQTIRLLNAELRRGRTPKYARHWTI
KVPVGRGQMVLANLPRVRFYVVREIRKHRVVRGESLRKIARRYKVSMRTIARANRLKRYR
VRAGQLLRIPVQTQVFYLAKAPGKALASHGSKRPIIYMVKKGDSLWKIANRFGVSLEDLR
SWNQLESKILYPGTLLTIWPGV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctaggtattatagtggctttgctcgttctcttcctctccacggcagagattctc
gccagttctaaaacttcattgacttctttagaggtttctccagactattcttctttgacc
ggagaggctgaagatgaaagcgaagaaggggagctctttgatagtagtgcctttcaggga
gcaaatctccccctcactctcaatgaaaaagttcaatattttatagaactttatcagact
tcccaacgagaggtttttaaactctggctctctcgttcgactcgttatcttccaatgatc
aagcgcatttttcgggaatatggtttaccagaagatttggcctatctggctatgattgag
agtggttttaatccctttgcttattctcgagcccgggccgtaggtatgtggcagtttatc
aaaggcacagccaggcgctatggactcaaagtcaactactggatagacgagaggcgagat
ccagaaaaggccacaaaggcggcggccagatatctcctggatctttatcaggagtttgag
tgctggcatctggcttcggctggttacaatgccggagagactaagatccgtaaggctata
aggcgctataagacgaaagatttttgggaactggccaaatatcgctatcttaaaagggaa
accaaaaactatgttcccgccttaatagccgctattcttattgctaaaaatccagaaaaa
tatggctttaccgatgttaaatatcttcctcctctagaatatgaaaagatagaagttcca
ggaaacatctctcttaaagcgatagccttagcagcaggagtagattatcaaactatccgc
cttctgaatgctgaattgcgtcgcggacggactcccaaatatgcccgacactggacgata
aaagttcctgttggccgagggcagatggttttggccaatctgcctcgggttagattctac
gtagttcgtgagatcagaaaacatcgggtagttcggggagaaagtctgcgcaagatagct
cgtcgttataaagtctctatgagaactatagctcgggctaacaggctcaagagatatcgc
gtccgagctggtcagctcctgcggatccctgtccagacccaggttttttatctggccaag
gccccaggtaaggctcttgcctcccacggttctaagaggccgatcatttatatggttaaa
aagggagattctctttggaaaattgcgaatcgttttggtgtaagtctagaagatctccgc
tcttggaaccaattggaatccaagatcctttatcccggtaccctcttaactatctggcct
ggagtttaa
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