Thermosulfuriphilus ammonigenes: G4V39_09760
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Entry
G4V39_09760 CDS
T06469
Name
(GenBank) DUF3553 domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tav
Thermosulfuriphilus ammonigenes
Pathway
tav03420
Nucleotide excision repair
tav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G4V39_09760
03430 Mismatch repair
G4V39_09760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tav03400
]
G4V39_09760
Enzymes [BR:
tav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G4V39_09760
DNA repair and recombination proteins [BR:
tav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G4V39_09760
MMR (mismatch excision repair)
Other MMR factors
G4V39_09760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DUF3553
AAA_30
Viral_helicase1
DEAD
CarD_TRCF_RID
AAA_12
PDZ_1
Motif
Other DBs
NCBI-ProteinID:
QIJ72537
UniProt:
A0A6G7PY78
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All DBs
Position
1999685..2001823
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AA seq
712 aa
AA seq
DB search
MKRIDYQALLNPAQYEAVTTLYGPLLVIAGAGSGKTRTLVYRMARLVEEGIPPEKILLLT
FTRKAATEMLRRASAILSEDRCERVLGGTFHSLSHLMLREYGELVGLSRHFTIMDRGDAE
DAINLLRNALGLAGKGRRFPKKETIAAIFSKMVNKMMGLEDLIEAEYPHLLGDIEDLARL
FRHYVQYKLEHQLLDYDDLLVYWRRILAEFPRVRESVAERFNFIMVDEYQDTNHLQAEIV
RFMAEGHENVMVVGDDSQSIYSFRGANFRNILEFPRLFPGAKIIKLEENYRSTQPILDLA
NAAIARAKEKYTKCLHTKRKGGELPVVFRGRDEAEQSRFIADRILELREEGVELSDIAVL
FRSSYHSFDLELELTKRDIPFVKQGGMKLIETAHIKDIIAHLRIIVNPIDMLSWNRILLL
IEGVGPKTSQQLINYLRYTPEPIKALETYPAKPAIREGLGRLARTLLAMAKEGLSPEERL
EILFEYYLPLLSRVYHDDYPKREKDLDHLLSIVGRYQDLDDFLTDLALEPPEASVASVEP
YDTDRECLVLSTIHSAKGLEWHTVFVISLVEGRFPSGYSLGREDDLEEERRLFYVAVTRA
RERLYLTYPGTMYIPGQGRTIAKASRFLAELPARLSRNWHEIQAELSPDEASVVINIETG
PAFQPGEWVKHPVFGTGQVRGMTDQHKVVVNFETAGTKTLHLKYVKLERLAP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggatagattatcaggcccttttgaaccccgcccaatatgaggctgtaaccact
ctctatggccctcttttggttattgccggggcgggctccggtaagaccagaaccctcgtt
tatcgaatggcccgcttggtagaggaagggatccctccagagaagattctccttctgact
tttacccgaaaggcggctaccgaaatgcttcgccgggcctcggctatcctctcggaagat
cgttgcgaacgggttctgggggggacctttcatagcctctcccatctgatgctccgagaa
tatggggagctggtgggcctgtcccgccacttcaccattatggatcgcggtgatgccgaa
gatgctattaaccttctgcgtaatgcccttggtcttgcaggaaagggacgacgttttccc
aaaaaggagaccatcgctgctattttcagcaagatggttaacaaaatgatgggactggag
gatctcatcgaggccgaatatccccaccttttaggagacatagaggatctagcccggctt
tttcgccactatgttcaatataaactggagcatcaactcctggactatgatgatctactt
gtctactggcggcgcatattggctgaattccccagggtgcgggagtctgtggctgagcgc
tttaatttcataatggttgatgaatatcaggataccaaccacctgcaggcagaaatagtt
cgctttatggctgaaggacatgagaatgtcatggtggttggggatgattcccagtctatc
tattctttcagaggggccaattttcgtaatatcttagaatttcctcgtctcttccccggg
gccaagatcatcaaactggaagaaaactaccgaagtacccagcctattttagatttggcc
aatgccgccattgcccgggctaaagagaaatacaccaaatgccttcacaccaaaagaaag
ggaggagagcttccggtagtttttcgcggtcgcgatgaggctgagcagagtcgatttatt
gccgacaggatcctcgaacttcgtgaggagggtgtagaactttccgatatcgccgtgctt
tttcgttctagttaccactcttttgatctggaactggagctaaccaagagggacattccc
tttgtcaaacaagggggaatgaagcttatcgaaacagcccatataaaagacattattgct
cacctaagaattatcgttaatccaatagatatgctttcctggaatcggattctccttctt
attgagggggtggggcctaagaccagccaacagcttataaactatctgcgttataccccc
gagcccatcaaggccctagagacctatccagccaagccggctataagagaaggccttggt
cgattggccaggacccttttagccatggccaaagagggactttctccggaggagcgtttg
gagatactttttgagtattaccttccgcttctctcccgggtctaccatgacgattatccc
aagcgggaaaaggatcttgatcatcttctttccattgtcggtcgctaccaggacctggat
gattttctaaccgatctggcccttgaacctcctgaagccagcgtcgcctctgtagagcct
tacgatactgatcgagaatgtttggttctttcgactattcattcggctaagggcctggag
tggcatacggtctttgttatctctcttgtggaaggtcgtttcccctcaggatattctctc
ggccgagaggatgatcttgaagaggagagacgtcttttctatgtagcggttaccagggcc
agggagcgcctttatcttacctacccggggacaatgtatattcctggccaggggaggacc
atcgctaaagcctcccgttttttggctgagcttccagcaaggctcagtcgtaattggcac
gaaatacaggctgaactgtccccggatgaggcttcggtggtcattaatatcgaaactggt
ccggcctttcagcccggtgagtgggtcaaacatccggtcttcgggacgggtcaggtaaga
ggtatgaccgatcaacataaggttgttgtgaattttgaaactgccggaaccaagaccctc
cacctcaaatatgtcaaactagaacgactggccccatga
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