Tabrizicola piscis: EI545_02930
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Entry
EI545_02930 CDS
T05742
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
taw
Tabrizicola piscis
Pathway
taw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI545_02930 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taw03019
]
EI545_02930 (recQ)
03400 DNA repair and recombination proteins [BR:
taw03400
]
EI545_02930 (recQ)
Enzymes [BR:
taw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI545_02930 (recQ)
Messenger RNA biogenesis [BR:
taw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EI545_02930 (recQ)
DNA repair and recombination proteins [BR:
taw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EI545_02930 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Rhodanese
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AZL57880
UniProt:
A0A3S8U2N1
LinkDB
All DBs
Position
615332..617374
Genome browser
AA seq
680 aa
AA seq
DB search
MDRAASLLHSVFGFPDFRPGQAEIVQAVLEGRNTLAIMPTGGGKSLCFQLPALCRDGVTV
VISPLIALMRDQVRALKAAGVEAGALTSGNTEEETEEVFAALDQGRLKLLYMAPERLASG
ATATLLRRVGCSLIAVDEAHCVSQWGHDFRPDYLRIGELRRMLRVPLAAFTATADEETRA
EIVTRLFDGEAPATFLRGFDRPNIHLAFAVKSTPRDQILRFAAARKGQSGIVYCGTRAKT
EVLAQALREAGHPSVAYHGGMEAEARRQVEIRFQREDGLIVVATVAFGMGIDKPDIRWVA
HADLPKSIEGYYQEIGRAGRDGSPAETLTLYGPDDIRLRRSQIDEGAAPPDRKAADHARL
NALLGLAEALKCRRQVLLGYFGETAEPCGNCDLCDRPAQLFDATEAVRKALSAILRTGEW
FGAGHLIDILTGNATAKVRERGHDQLPTYAVGRDLSKAAWGAVFRQMMGQDLVRPDPDRH
GALRMTEAARPILRGEAQITLRRDTVASAGEREAVKAQVADEDVGLLSLLKARRRALAEA
QNVPAYVVFPDRTLIEMAERKPASLDQMAGITGVGAKKLESYGAAFLEVITGASETLHPA
RMRLVGKPEGAVFDRLAEVQLALSRGEDGTGKYLSCTHSTLRQIAERRPSTLAELQDIQG
MGVLKVERFGEAFLSVLREG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
ttggaccgcgccgcctcgcttctgcactccgtcttcgggttccccgattttcgccccggc
caggcggaaatcgtgcaagctgtgctggaggggcgcaatacccttgccatcatgcccacg
ggcggcggcaagtccctgtgtttccagctgcccgccctgtgccgcgatggggtgaccgtc
gtcatctcaccgctgatcgccctgatgcgtgatcaagtccgcgcgctgaaggcggcgggc
gtcgaggcgggggccctgacctcgggcaataccgaggaggagacggaagaggttttcgca
gcccttgaccaagggcggctgaagctcctctacatggcgcccgaacgccttgcctccggc
gcaacggccaccctcttgcgccgggtgggctgcagcctgattgccgtggacgaggcgcat
tgcgtcagccagtggggccacgacttccgccccgattacctgcgcattggcgagctacgc
cggatgctgcgcgtgccgctggccgccttcaccgccaccgcggacgaagaaacccgcgcc
gaaatcgtcacccgcctgtttgatggcgaggccccggccaccttcctgcgcggctttgac
cggccgaacatccaccttgccttcgccgtgaaatccaccccgcgcgatcagatcctgcgc
tttgccgccgcccggaaagggcagtccggcatcgtctactgcggcacccgcgccaagacc
gaagtgctggcccaggccctgcgcgaagcagggcatccctccgttgcctatcacggcggg
atggaggccgaggcgcggcgtcaggtcgaaatccgctttcagcgcgaggatgggctgatc
gtggtggccacggtggcctttgggatggggatcgacaagcccgatatccgctgggtcgcc
catgccgacctgcccaagtcgatcgaggggtactaccaggaaatcggccgcgccggacgc
gacggctctccggccgaaacgctgacgctctatggccccgacgacatccgcctgcgccgc
agccagatcgacgaaggcgccgccccgcccgaccggaaggccgccgaccatgcccggctg
aacgcacttctggggctggccgaggcgctgaaatgccgccgtcaggtgttgctgggctac
ttcggtgagacggccgagccctgcggcaactgtgacctttgcgaccgccccgcccagctt
ttcgacgcgaccgaggccgtgcgcaaggccttgtcggcgatcttgcggaccggggagtgg
ttcggcgcggggcatctgatcgacatcctgaccggcaacgccaccgccaaggtccgcgaa
cgcggccatgaccagttgccgacctatgccgtggggcgggatctgtccaaggccgcctgg
ggcgcggtctttcggcagatgatgggacaggaccttgtccgccccgaccccgaccgccac
ggcgcgctgcgcatgaccgaggccgcgcgcccgatcctgcggggggaggcgcagatcacc
ctgcggcgcgacaccgtcgcatcagcgggcgagcgtgaggccgtgaaggcccaagtcgcg
gatgaggatgtggggcttctgtcgttgctcaaggcacgccgcagggcgctggccgaggcg
cagaatgtgccggcctatgtggtctttcccgaccgcaccctgatcgagatggccgaacgc
aagcccgcgagccttgaccagatggccgggatcaccggggtgggggcgaagaagctggaa
agctacggcgcggcgtttctggaggtgatcaccggggcctccgaaaccctgcaccccgcg
cggatgcggctggtgggcaagcccgagggcgcggtgtttgaccggctggccgaggtgcaa
ctggccctgtcacggggcgaggatgggacggggaagtatctgtcctgcacccattccacc
ctgcggcagatcgcggagcggcggccttcgaccctcgcggagttgcaggacatccaggga
atgggagtgttgaaggtggagcgctttggggaggcgttcctgtctgtgctgcgcgagggc
tga
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